G1536222


Basic Information

Item Value
gene id G1536222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 29908755 ~ 29909061 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1758380
cttctctagtgtgccagtggccatcgaaggtgagcattttctcactgaagtcggttacgacaccaaactgcagtcaggtcaagaccctggtgaggacgacgagcatgctGACGttcttccctgagacggtttctgacagattgtgcagaaattctttggttgagtaaacccacagtttcatcagctgtccgggtggctcgtATCAGaccatcctgcaggtgaagaagctggatgagGAGGTCTGCGAAtagtgaggccggttggatgtactgccaaattcaatAAAATAACATTGAAGGTGGATTAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1758380 True 307 lncRNA 0.49 1 29908755 29909061

Neighbor

gene id symbol gene type direction distance location
LOC110495972 NA coding upstream 1173526 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 1236062 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 1264659 28633811 ~ 28644214 (+)
LOC110495966 LOC106575106 coding upstream 1313547 28521480 ~ 28595208 (+)
LOC110496786 NA coding upstream 1429087 28474349 ~ 28479668 (+)
zgc:174945 LOC106574385 coding downstream 273171 30182232 ~ 30186368 (+)
cckbra LOC106575124 coding downstream 324630 30233691 ~ 30254904 (+)
LOC118940974 LOC108266561 coding downstream 609559 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 625953 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 817746 30726807 ~ 30749687 (+)
G1536221 NA non-coding upstream 32 29908481 ~ 29908723 (+)
G1536204 NA non-coding upstream 10270 29898185 ~ 29898485 (+)
G1536172 NA non-coding upstream 30678 29877731 ~ 29878077 (+)
G1536169 NA non-coding upstream 32216 29876309 ~ 29876539 (+)
G1535440 NA non-coding upstream 457562 29428870 ~ 29451193 (+)
G1536233 yo84 non-coding downstream 6265 29915326 ~ 29915546 (+)
G1536247 NA non-coding downstream 12671 29921732 ~ 29921933 (+)
G1536250 NA non-coding downstream 14848 29923909 ~ 29924308 (+)
G1536252 NA non-coding downstream 15369 29924430 ~ 29924675 (+)
G1536253 LOC100380853 non-coding downstream 19108 29928169 ~ 29928422 (+)
G1534495 NA other upstream 1095652 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 1104082 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 1870279 27974813 ~ 28038476 (+)
LOC110495958 LOC106574318 other upstream 1958533 27943362 ~ 27958807 (+)
G1536720 NA other downstream 388070 30297131 ~ 30297346 (+)
G1537251 NA other downstream 913447 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 1659830 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 1669106 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 1844649 31753710 ~ 31754191 (+)

Expression


Co-expression Network