G1536233 (yo84)


Basic Information

Item Value
gene id G1536233
gene name yo84
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 29915326 ~ 29915546 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1758391
ggcctggtttagatcttatctgtcggaaagatatcagtttgtctctgtgaatggtttgtcctctgacaaatcatctgtaaatttcggtgttcctcaaggttccgttttaggaccactattgttttcactatatattttacctcaaagggatgtcattcgaaaacataatgttaactttcactgctatgcggatgacacacagctgtacatttcaatgaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1758391 True 221 lncRNA 0.38 1 29915326 29915546

Neighbor

gene id symbol gene type direction distance location
LOC110495972 NA coding upstream 1180097 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 1242633 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 1271230 28633811 ~ 28644214 (+)
LOC110495966 LOC106575106 coding upstream 1320118 28521480 ~ 28595208 (+)
LOC110496786 NA coding upstream 1435658 28474349 ~ 28479668 (+)
zgc:174945 LOC106574385 coding downstream 266686 30182232 ~ 30186368 (+)
cckbra LOC106575124 coding downstream 318145 30233691 ~ 30254904 (+)
LOC118940974 LOC108266561 coding downstream 603074 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 619468 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 811261 30726807 ~ 30749687 (+)
G1536222 NA non-coding upstream 6265 29908755 ~ 29909061 (+)
G1536221 NA non-coding upstream 6603 29908481 ~ 29908723 (+)
G1536204 NA non-coding upstream 16841 29898185 ~ 29898485 (+)
G1536172 NA non-coding upstream 37249 29877731 ~ 29878077 (+)
G1536169 NA non-coding upstream 38787 29876309 ~ 29876539 (+)
G1536247 NA non-coding downstream 6186 29921732 ~ 29921933 (+)
G1536250 NA non-coding downstream 8363 29923909 ~ 29924308 (+)
G1536252 NA non-coding downstream 8884 29924430 ~ 29924675 (+)
G1536253 LOC100380853 non-coding downstream 12623 29928169 ~ 29928422 (+)
G1536263 NA non-coding downstream 21563 29937109 ~ 29937372 (+)
G1534495 NA other upstream 1102223 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 1110653 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 1876850 27974813 ~ 28038476 (+)
LOC110495958 LOC106574318 other upstream 1965104 27943362 ~ 27958807 (+)
G1536720 NA other downstream 381585 30297131 ~ 30297346 (+)
G1537251 NA other downstream 906962 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 1653345 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 1662621 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 1838164 31753710 ~ 31754191 (+)

Expression


Co-expression Network