G1536304


Basic Information

Item Value
gene id G1536304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 29965337 ~ 29965641 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1758462
ggattcagcgtgagacgctacctttaaccctcactgtttctggtaatcatagtgaaaccatttcttttttaatttttcgttcaccttttacacctgttgttttgggccatccctggctagtttgtcataatccttccattaattggtctagtaattctatcctcttctggaacgtctcttgtcatgtgaaatgtttaatgtctgctatccctcctgtttcctctgtctcttcttcacaggaggagcctggtgatttgacaggggtgccggaggaatatcacgatctgcgcacggtgttcagtcgg

Function

NR:

description
PREDICTED: retrotransposon-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1758462 True 305 lncRNA 0.44 1 29965337 29965641

Neighbor

gene id symbol gene type direction distance location
LOC110495972 NA coding upstream 1230108 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 1292644 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 1321241 28633811 ~ 28644214 (+)
LOC110495966 LOC106575106 coding upstream 1370129 28521480 ~ 28595208 (+)
LOC110496786 NA coding upstream 1485669 28474349 ~ 28479668 (+)
zgc:174945 LOC106574385 coding downstream 216591 30182232 ~ 30186368 (+)
cckbra LOC106575124 coding downstream 268050 30233691 ~ 30254904 (+)
LOC118940974 LOC108266561 coding downstream 552979 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 569373 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 761166 30726807 ~ 30749687 (+)
G1536263 NA non-coding upstream 27965 29937109 ~ 29937372 (+)
G1536253 LOC100380853 non-coding upstream 36915 29928169 ~ 29928422 (+)
G1536252 NA non-coding upstream 40662 29924430 ~ 29924675 (+)
G1536250 NA non-coding upstream 41029 29923909 ~ 29924308 (+)
G1536247 NA non-coding upstream 43404 29921732 ~ 29921933 (+)
G1536311 NA non-coding downstream 8772 29974413 ~ 29974637 (+)
G1536347 NA non-coding downstream 45309 30010950 ~ 30011184 (+)
G1536434 NA non-coding downstream 109948 30075589 ~ 30075823 (+)
G1536526 NA non-coding downstream 261569 30227210 ~ 30227686 (+)
G1536534 NA non-coding downstream 276920 30242561 ~ 30242865 (+)
G1534495 NA other upstream 1152234 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 1160664 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 1926861 27974813 ~ 28038476 (+)
LOC110495958 LOC106574318 other upstream 2015115 27943362 ~ 27958807 (+)
G1536720 NA other downstream 331490 30297131 ~ 30297346 (+)
G1537251 NA other downstream 856867 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 1603250 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 1612526 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 1788069 31753710 ~ 31754191 (+)

Expression


Co-expression Network