Gene
RNA
| Item | Value |
|---|---|
| gene id | G1536325 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 29984743 ~ 29985132 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109108415 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1758483 | True | 390 | lncRNA | 0.55 | 1 | 29984743 | 29985132 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495975 | LOC106574338 | coding | downstream | 143144 | 29414177 ~ 29841599 (-) |
| LOC110495976 | NA | coding | downstream | 487271 | 29496293 ~ 29497472 (-) |
| LOC110496788 | gart | coding | downstream | 710010 | 29253527 ~ 29274733 (-) |
| LOC110495974 | LOC106574337 | coding | downstream | 1179388 | 28771350 ~ 28805355 (-) |
| LOC110495973 | LOC106574336 | coding | downstream | 1216680 | 28760672 ~ 28768063 (-) |
| LOC110495979 | LOC106574339 | coding | upstream | 332244 | 30317376 ~ 30396869 (-) |
| LOC110496790 | lig4 | coding | upstream | 432711 | 30417843 ~ 30441655 (-) |
| LOC110495980 | irs2 | coding | upstream | 471734 | 30456866 ~ 30476059 (-) |
| LOC110496791 | cars2 | coding | upstream | 504551 | 30489683 ~ 30497834 (-) |
| LOC110515180 | NA | coding | upstream | 513051 | 30498183 ~ 30502180 (-) |
| G1536299 | NA | non-coding | downstream | 24295 | 29960188 ~ 29960448 (-) |
| G1536280 | NA | non-coding | downstream | 36416 | 29948048 ~ 29948327 (-) |
| G1536273 | NA | non-coding | downstream | 40126 | 29944401 ~ 29944617 (-) |
| G1536211 | NA | non-coding | downstream | 81802 | 29902740 ~ 29902941 (-) |
| G1536338 | NA | non-coding | upstream | 16574 | 30001706 ~ 30001912 (-) |
| G1536348 | NA | non-coding | upstream | 25878 | 30011010 ~ 30011212 (-) |
| G1536432 | NA | non-coding | upstream | 86918 | 30072050 ~ 30072364 (-) |
| G1536548 | NA | non-coding | upstream | 94783 | 30079915 ~ 30094235 (-) |
| G1536560 | NA | non-coding | upstream | 116653 | 30101785 ~ 30114002 (-) |
| LOC110495963 | LOC106574327 | other | downstream | 1632125 | 28241494 ~ 28368147 (-) |
| LOC110495955 | LOC106574324 | other | downstream | 1948127 | 27995381 ~ 28092196 (-) |
| LOC110496785 | LOC106574363 | other | downstream | 2070223 | 27839770 ~ 27914607 (-) |
| LOC110495948 | LOC106574314 | other | downstream | 2186130 | 27754174 ~ 27798978 (-) |
| G1533378 | NA | other | downstream | 2795194 | 27187622 ~ 27189549 (-) |
| G1536703 | NA | other | upstream | 299240 | 30284372 ~ 30284762 (-) |
| G1537022 | NA | other | upstream | 534760 | 30519892 ~ 30525373 (-) |
| G1537091 | NA | other | upstream | 617584 | 30602716 ~ 30603392 (-) |
| LOC110495992 | LOC106588166 | other | upstream | 926695 | 30911827 ~ 30955199 (-) |
| LOC110495994 | LOC106588168 | other | upstream | 1026746 | 31008756 ~ 31014201 (-) |
