G1536538


Basic Information

Item Value
gene id G1536538
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 30248096 ~ 30248325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1758704
atctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagacatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttgccaacaatgcaaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1758704 True 230 lncRNA 0.41 1 30248096 30248325

Neighbor

gene id symbol gene type direction distance location
zgc:174945 LOC106574385 coding upstream 61728 30182232 ~ 30186368 (+)
LOC110495972 NA coding upstream 1512867 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 1575403 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 1604000 28633811 ~ 28644214 (+)
LOC110495966 LOC106575106 coding upstream 1652888 28521480 ~ 28595208 (+)
LOC118940974 LOC108266561 coding downstream 270295 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 286689 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 478482 30726807 ~ 30749687 (+)
LOC110496795 LOC106588160 coding downstream 512242 30760567 ~ 30762897 (+)
znf687b LOC106588162 coding downstream 518813 30767138 ~ 30776858 (+)
G1536535 NA non-coding upstream 3180 30244548 ~ 30244916 (+)
G1536534 NA non-coding upstream 5231 30242561 ~ 30242865 (+)
G1536526 NA non-coding upstream 20410 30227210 ~ 30227686 (+)
G1536434 NA non-coding upstream 172273 30075589 ~ 30075823 (+)
G1536347 NA non-coding upstream 236912 30010950 ~ 30011184 (+)
G1536540 NA non-coding downstream 3187 30251512 ~ 30251747 (+)
cckbra LOC106575124 non-coding downstream 5948 30233691 ~ 30254904 (+)
G1536498 NA non-coding downstream 13655 30261980 ~ 30262420 (+)
G1536499 NA non-coding downstream 15385 30263710 ~ 30264111 (+)
G1536677 NA non-coding downstream 17688 30266013 ~ 30266650 (+)
G1534495 NA other upstream 1434993 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 1443423 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 2209620 27974813 ~ 28038476 (+)
LOC110495958 LOC106574318 other upstream 2297874 27943362 ~ 27958807 (+)
G1536720 NA other downstream 48806 30297131 ~ 30297346 (+)
G1537251 NA other downstream 574183 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 1320566 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 1329842 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 1505385 31753710 ~ 31754191 (+)

Expression


Co-expression Network