G1536540


Basic Information

Item Value
gene id G1536540
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 30251512 ~ 30251747 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1758706
agaccctttactcagtacttttttgaagcacctttggcagctattacagccttgagtgttcttgggtatggtgctacaaacttggcacacctatatgaggagtttctcccattcttctcttcagatcctctcaagatctgtgaTGTTGCTGCCCAgctaagccactcctgcattgccttGGTTGTGTGCTCAAAGTCGTTGtccggttggaaggtgaaccttcgccccagtctgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1758706 True 236 lncRNA 0.48 1 30251512 30251747

Neighbor

gene id symbol gene type direction distance location
zgc:174945 LOC106574385 coding upstream 65144 30182232 ~ 30186368 (+)
LOC110495972 NA coding upstream 1516283 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 1578819 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 1607416 28633811 ~ 28644214 (+)
LOC110495966 LOC106575106 coding upstream 1656304 28521480 ~ 28595208 (+)
LOC118940974 LOC108266561 coding downstream 266873 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 283267 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 475060 30726807 ~ 30749687 (+)
LOC110496795 LOC106588160 coding downstream 508820 30760567 ~ 30762897 (+)
znf687b LOC106588162 coding downstream 515391 30767138 ~ 30776858 (+)
G1536538 NA non-coding upstream 3187 30248096 ~ 30248325 (+)
G1536535 NA non-coding upstream 6596 30244548 ~ 30244916 (+)
G1536534 NA non-coding upstream 8647 30242561 ~ 30242865 (+)
G1536526 NA non-coding upstream 23826 30227210 ~ 30227686 (+)
G1536434 NA non-coding upstream 175689 30075589 ~ 30075823 (+)
cckbra LOC106575124 non-coding downstream 2526 30233691 ~ 30254904 (+)
G1536498 NA non-coding downstream 10233 30261980 ~ 30262420 (+)
G1536499 NA non-coding downstream 11963 30263710 ~ 30264111 (+)
G1536677 NA non-coding downstream 14266 30266013 ~ 30266650 (+)
G1536679 NA non-coding downstream 17049 30268796 ~ 30269054 (+)
G1534495 NA other upstream 1438409 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 1446839 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 2213036 27974813 ~ 28038476 (+)
LOC110495958 LOC106574318 other upstream 2301290 27943362 ~ 27958807 (+)
G1536720 NA other downstream 45384 30297131 ~ 30297346 (+)
G1537251 NA other downstream 570761 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 1317144 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 1326420 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 1501963 31753710 ~ 31754191 (+)

Expression


Co-expression Network