Gene
RNA
| Item | Value |
|---|---|
| gene id | G1536672 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 30260050 ~ 30260394 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1758839 | True | 345 | lncRNA | 0.43 | 1 | 30260050 | 30260394 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495975 | LOC106574338 | coding | downstream | 418451 | 29414177 ~ 29841599 (-) |
| LOC110495976 | NA | coding | downstream | 762578 | 29496293 ~ 29497472 (-) |
| LOC110496788 | gart | coding | downstream | 985317 | 29253527 ~ 29274733 (-) |
| LOC110495974 | LOC106574337 | coding | downstream | 1454695 | 28771350 ~ 28805355 (-) |
| LOC110495973 | LOC106574336 | coding | downstream | 1491987 | 28760672 ~ 28768063 (-) |
| LOC110495979 | LOC106574339 | coding | upstream | 56982 | 30317376 ~ 30396869 (-) |
| LOC110496790 | lig4 | coding | upstream | 157449 | 30417843 ~ 30441655 (-) |
| LOC110495980 | irs2 | coding | upstream | 196472 | 30456866 ~ 30476059 (-) |
| LOC110496791 | cars2 | coding | upstream | 229289 | 30489683 ~ 30497834 (-) |
| LOC110515180 | NA | coding | upstream | 237789 | 30498183 ~ 30502180 (-) |
| G1536666 | NA | non-coding | downstream | 4917 | 30254859 ~ 30255133 (-) |
| G1536665 | NA | non-coding | downstream | 6217 | 30253626 ~ 30253833 (-) |
| G1536661 | NA | non-coding | downstream | 9399 | 30250448 ~ 30250651 (-) |
| G1536659 | NA | non-coding | downstream | 15756 | 30244074 ~ 30244294 (-) |
| G1536560 | NA | non-coding | downstream | 146048 | 30101785 ~ 30114002 (-) |
| G1536675 | NA | non-coding | upstream | 3064 | 30263458 ~ 30264332 (-) |
| G1536676 | NA | non-coding | upstream | 4011 | 30264405 ~ 30264733 (-) |
| G1536678 | NA | non-coding | upstream | 6463 | 30266857 ~ 30267321 (-) |
| G1536680 | NA | non-coding | upstream | 9045 | 30269439 ~ 30269680 (-) |
| G1536708 | NA | non-coding | upstream | 26661 | 30287055 ~ 30287262 (-) |
| LOC110495963 | LOC106574327 | other | downstream | 1907432 | 28241494 ~ 28368147 (-) |
| LOC110495955 | LOC106574324 | other | downstream | 2223434 | 27995381 ~ 28092196 (-) |
| LOC110496785 | LOC106574363 | other | downstream | 2345530 | 27839770 ~ 27914607 (-) |
| LOC110495948 | LOC106574314 | other | downstream | 2461437 | 27754174 ~ 27798978 (-) |
| G1533378 | NA | other | downstream | 3070501 | 27187622 ~ 27189549 (-) |
| G1536703 | NA | other | upstream | 23978 | 30284372 ~ 30284762 (-) |
| G1537022 | NA | other | upstream | 259498 | 30519892 ~ 30525373 (-) |
| G1537091 | NA | other | upstream | 342322 | 30602716 ~ 30603392 (-) |
| LOC110495992 | LOC106588166 | other | upstream | 651433 | 30911827 ~ 30955199 (-) |
| LOC110495994 | LOC106588168 | other | upstream | 751484 | 31008756 ~ 31014201 (-) |
