G1536675


Basic Information

Item Value
gene id G1536675
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 30263458 ~ 30264332 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1758842
CCCAAGATTAAGCACAGAAACGTTTATACAATAAACAGAACCATAGAAGGAATCATATAATGCACATGATATGTCAGCATCTTTCGAAAATATGCTCTTGGCTTACTATTATTTGGCAGAAATTatacatcaaatcacatttagattCCCATTTATCCTGTATTAAATCAATTGCAGTTAATTAGATTTCAGATTATACTTTCAGAAGTGTGTTTAAGTGGGTGGGCGTCGTGTAAAGTGAGAGGCCATCCTATCGCCTCTAACCACAGAACATCAGCCATCGTTTTCCTTTAATTTCCAGACGATTCTGCATATTGAATCGTCACCGTTTGTCGTCTGCCAGGAAGTGATCAATTGCGCACGTCCGACATTTGTGTTGGTCTGTCTTGTCCCTTTGGTTTGCAAAGCAGCATGTCCTGGATGAAGAATATAGTTGTCACTTGATGTATAAATTGTCAGTCTGGTTTTGTGTGCAAGATTAGTTTTCAATCAGGTTTTGtatctcccattctccctccatcCAAGACACACTGGCACTGCTTGTGCAAAACCAAGATACCTCTGAGTGAACTATCAGTAAAGCCACTATCATTTAATACTGTCTTAAATCAAGTTCTCATTTGGACTACATTGCATGCATTACTCTGTCAATGCGAATAACAAGAAGGAATAGAGCAAAGAAAAACAGCGATAGATCCTTAACTAAATAAAAAAGCATGCATCACCAGACTAAGAACAAATGATAGACAAAGACAACAAGGCAGTTTAATCATGTATTGTAAATTAATAAAGTCCCCTAGGTAATTTAGTTGGTGCCACGTGGTACCTTGAAACGTACAAGACAATTATTGGAAAACGAGGCGAGACCAAGATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1758842 True 875 lncRNA 0.38 1 30263458 30264332

Neighbor

gene id symbol gene type direction distance location
LOC110495975 LOC106574338 coding downstream 421859 29414177 ~ 29841599 (-)
LOC110495976 NA coding downstream 765986 29496293 ~ 29497472 (-)
LOC110496788 gart coding downstream 988725 29253527 ~ 29274733 (-)
LOC110495974 LOC106574337 coding downstream 1458103 28771350 ~ 28805355 (-)
LOC110495973 LOC106574336 coding downstream 1495395 28760672 ~ 28768063 (-)
LOC110495979 LOC106574339 coding upstream 53044 30317376 ~ 30396869 (-)
LOC110496790 lig4 coding upstream 153511 30417843 ~ 30441655 (-)
LOC110495980 irs2 coding upstream 192534 30456866 ~ 30476059 (-)
LOC110496791 cars2 coding upstream 225351 30489683 ~ 30497834 (-)
LOC110515180 NA coding upstream 233851 30498183 ~ 30502180 (-)
G1536672 NA non-coding downstream 3064 30260050 ~ 30260394 (-)
G1536666 NA non-coding downstream 8325 30254859 ~ 30255133 (-)
G1536665 NA non-coding downstream 9625 30253626 ~ 30253833 (-)
G1536661 NA non-coding downstream 12807 30250448 ~ 30250651 (-)
G1536659 NA non-coding downstream 19164 30244074 ~ 30244294 (-)
G1536676 NA non-coding upstream 73 30264405 ~ 30264733 (-)
G1536678 NA non-coding upstream 2525 30266857 ~ 30267321 (-)
G1536680 NA non-coding upstream 5107 30269439 ~ 30269680 (-)
G1536708 NA non-coding upstream 22723 30287055 ~ 30287262 (-)
G1536877 NA non-coding upstream 43336 30307668 ~ 30312660 (-)
LOC110495963 LOC106574327 other downstream 1910840 28241494 ~ 28368147 (-)
LOC110495955 LOC106574324 other downstream 2226842 27995381 ~ 28092196 (-)
LOC110496785 LOC106574363 other downstream 2348938 27839770 ~ 27914607 (-)
LOC110495948 LOC106574314 other downstream 2464845 27754174 ~ 27798978 (-)
G1533378 NA other downstream 3073909 27187622 ~ 27189549 (-)
G1536703 NA other upstream 20040 30284372 ~ 30284762 (-)
G1537022 NA other upstream 255560 30519892 ~ 30525373 (-)
G1537091 NA other upstream 338384 30602716 ~ 30603392 (-)
LOC110495992 LOC106588166 other upstream 647495 30911827 ~ 30955199 (-)
LOC110495994 LOC106588168 other upstream 747546 31008756 ~ 31014201 (-)

Expression


Co-expression Network