Gene
RNA
| Item | Value |
|---|---|
| gene id | G1536677 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 30266013 ~ 30266650 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_16446 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1758844 | True | 638 | lncRNA | 0.46 | 1 | 30266013 | 30266650 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cckbra | LOC106575124 | coding | upstream | 11109 | 30233691 ~ 30254904 (+) |
| zgc:174945 | LOC106574385 | coding | upstream | 79645 | 30182232 ~ 30186368 (+) |
| LOC110495972 | NA | coding | upstream | 1530784 | 28732589 ~ 28735229 (+) |
| LOC110495968 | LOC106574333 | coding | upstream | 1593320 | 28646581 ~ 28672693 (+) |
| LOC110496787 | LOC106575108 | coding | upstream | 1621917 | 28633811 ~ 28644214 (+) |
| LOC118940974 | LOC108266561 | coding | downstream | 251970 | 30518620 ~ 30519442 (+) |
| LOC110496792 | cars2 | coding | downstream | 268364 | 30535014 ~ 30539520 (+) |
| LOC110495985 | LOC106588159 | coding | downstream | 460157 | 30726807 ~ 30749687 (+) |
| LOC110496795 | LOC106588160 | coding | downstream | 493917 | 30760567 ~ 30762897 (+) |
| znf687b | LOC106588162 | coding | downstream | 500488 | 30767138 ~ 30776858 (+) |
| G1536499 | NA | non-coding | upstream | 1902 | 30263710 ~ 30264111 (+) |
| G1536498 | NA | non-coding | upstream | 3593 | 30261980 ~ 30262420 (+) |
| G1536540 | NA | non-coding | upstream | 14266 | 30251512 ~ 30251747 (+) |
| G1536538 | NA | non-coding | upstream | 17688 | 30248096 ~ 30248325 (+) |
| G1536679 | NA | non-coding | downstream | 2146 | 30268796 ~ 30269054 (+) |
| G1536682 | NA | non-coding | downstream | 3769 | 30270419 ~ 30270694 (+) |
| G1536694 | NA | non-coding | downstream | 11147 | 30277797 ~ 30278000 (+) |
| G1536709 | NA | non-coding | downstream | 21185 | 30287835 ~ 30288136 (+) |
| G1536776 | NA | non-coding | downstream | 117098 | 30383748 ~ 30383977 (+) |
| G1534495 | NA | other | upstream | 1452910 | 28812829 ~ 28813103 (+) |
| G1534488 | LOC106574337 | other | upstream | 1461340 | 28804028 ~ 28804673 (+) |
| G1533121 | LOC106574322 | other | upstream | 2227537 | 27974813 ~ 28038476 (+) |
| LOC110495958 | LOC106574318 | other | upstream | 2315791 | 27943362 ~ 27958807 (+) |
| G1536720 | NA | other | downstream | 30481 | 30297131 ~ 30297346 (+) |
| G1537251 | NA | other | downstream | 555858 | 30822508 ~ 30828046 (+) |
| LOC110496006 | LOC106588175 | other | downstream | 1302241 | 31568375 ~ 31572239 (+) |
| LOC110496008 | LOC106588176 | other | downstream | 1311517 | 31578096 ~ 31580320 (+) |
| G1538208 | LOC106588182 | other | downstream | 1487060 | 31753710 ~ 31754191 (+) |
