G1536709


Basic Information

Item Value
gene id G1536709
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 30287835 ~ 30288136 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1758876
cacactgccctttcgcacctggacaaaaggaacacctatgtgagaatgctactcATTGACTAAGCTCAGCATTCAGCACtatagtgtcctcaaagctcattactaagctaaggaccctgggactaaacacctccctctacaactggatcctggacttactgacaggccgcccccaggtggaaaGGGTAGGTACCAactctgccacgctgatcctcaacacgggggcccctcaggggtgcgtgctcagtcccctcctgtactccctgttcacccatgactgcatggccaggcacaactccaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1758876 True 302 lncRNA 0.55 1 30287835 30288136

Neighbor

gene id symbol gene type direction distance location
cckbra LOC106575124 coding upstream 32931 30233691 ~ 30254904 (+)
zgc:174945 LOC106574385 coding upstream 101467 30182232 ~ 30186368 (+)
LOC110495972 NA coding upstream 1552606 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 1615142 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 1643739 28633811 ~ 28644214 (+)
LOC118940974 LOC108266561 coding downstream 230484 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 246878 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 438671 30726807 ~ 30749687 (+)
LOC110496795 LOC106588160 coding downstream 472431 30760567 ~ 30762897 (+)
znf687b LOC106588162 coding downstream 479002 30767138 ~ 30776858 (+)
G1536694 NA non-coding upstream 9835 30277797 ~ 30278000 (+)
G1536682 NA non-coding upstream 17141 30270419 ~ 30270694 (+)
G1536679 NA non-coding upstream 18781 30268796 ~ 30269054 (+)
G1536677 NA non-coding upstream 21185 30266013 ~ 30266650 (+)
G1536499 NA non-coding upstream 23724 30263710 ~ 30264111 (+)
G1536776 NA non-coding downstream 95612 30383748 ~ 30383977 (+)
G1536777 NA non-coding downstream 96281 30384417 ~ 30384647 (+)
G1536779 NA non-coding downstream 97729 30385865 ~ 30386092 (+)
G1536781 NA non-coding downstream 98817 30386953 ~ 30387249 (+)
G1536783 NA non-coding downstream 99581 30387717 ~ 30387943 (+)
G1534495 NA other upstream 1474732 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 1483162 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 2249359 27974813 ~ 28038476 (+)
LOC110495958 LOC106574318 other upstream 2337613 27943362 ~ 27958807 (+)
G1536720 NA other downstream 8995 30297131 ~ 30297346 (+)
G1537251 NA other downstream 534372 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 1280755 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 1290031 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 1465574 31753710 ~ 31754191 (+)

Expression


Co-expression Network