G1536777


Basic Information

Item Value
gene id G1536777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 30384417 ~ 30384647 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1758949
ccttcaatgctgcagaaatgttttggtacccttccccagatctgtgcctcaacacaatcctgtctcggtgctctaagctcaattccttcgaccttatgacttggtttttgctctaacatgcactgtcaactgtgggaccttatgtagacaggtgtgtgcctttccaaatcttgtccaatctattgaattaactacaggtggactccaatcatgttgttgaaacatctcaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1758949 True 231 lncRNA 0.44 1 30384417 30384647

Neighbor

gene id symbol gene type direction distance location
cckbra LOC106575124 coding upstream 129513 30233691 ~ 30254904 (+)
zgc:174945 LOC106574385 coding upstream 198049 30182232 ~ 30186368 (+)
LOC110495972 NA coding upstream 1649188 28732589 ~ 28735229 (+)
LOC110495968 LOC106574333 coding upstream 1711724 28646581 ~ 28672693 (+)
LOC110496787 LOC106575108 coding upstream 1740321 28633811 ~ 28644214 (+)
LOC118940974 LOC108266561 coding downstream 133973 30518620 ~ 30519442 (+)
LOC110496792 cars2 coding downstream 150367 30535014 ~ 30539520 (+)
LOC110495985 LOC106588159 coding downstream 342160 30726807 ~ 30749687 (+)
LOC110496795 LOC106588160 coding downstream 375920 30760567 ~ 30762897 (+)
znf687b LOC106588162 coding downstream 382491 30767138 ~ 30776858 (+)
G1536776 NA non-coding upstream 440 30383748 ~ 30383977 (+)
G1536709 NA non-coding upstream 96281 30287835 ~ 30288136 (+)
G1536694 NA non-coding upstream 106417 30277797 ~ 30278000 (+)
G1536682 NA non-coding upstream 113723 30270419 ~ 30270694 (+)
G1536679 NA non-coding upstream 115363 30268796 ~ 30269054 (+)
G1536779 NA non-coding downstream 1218 30385865 ~ 30386092 (+)
G1536781 NA non-coding downstream 2306 30386953 ~ 30387249 (+)
G1536783 NA non-coding downstream 3070 30387717 ~ 30387943 (+)
G1536847 NA non-coding downstream 84931 30469578 ~ 30491654 (+)
G1536830 NA non-coding downstream 111982 30496629 ~ 30498403 (+)
G1536720 NA other upstream 87071 30297131 ~ 30297346 (+)
G1534495 NA other upstream 1571314 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 1579744 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 2345941 27974813 ~ 28038476 (+)
G1537251 NA other downstream 437861 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 1184244 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 1193520 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 1369063 31753710 ~ 31754191 (+)
G1539641 NA other downstream 2635581 33020228 ~ 33020544 (+)

Expression


Co-expression Network