Gene
RNA
| Item | Value |
|---|---|
| gene id | G1536779 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 30385865 ~ 30386092 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1758951 | True | 228 | lncRNA | 0.47 | 1 | 30385865 | 30386092 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cckbra | LOC106575124 | coding | upstream | 130961 | 30233691 ~ 30254904 (+) |
| zgc:174945 | LOC106574385 | coding | upstream | 199497 | 30182232 ~ 30186368 (+) |
| LOC110495972 | NA | coding | upstream | 1650636 | 28732589 ~ 28735229 (+) |
| LOC110495968 | LOC106574333 | coding | upstream | 1713172 | 28646581 ~ 28672693 (+) |
| LOC110496787 | LOC106575108 | coding | upstream | 1741769 | 28633811 ~ 28644214 (+) |
| LOC118940974 | LOC108266561 | coding | downstream | 132528 | 30518620 ~ 30519442 (+) |
| LOC110496792 | cars2 | coding | downstream | 148922 | 30535014 ~ 30539520 (+) |
| LOC110495985 | LOC106588159 | coding | downstream | 340715 | 30726807 ~ 30749687 (+) |
| LOC110496795 | LOC106588160 | coding | downstream | 374475 | 30760567 ~ 30762897 (+) |
| znf687b | LOC106588162 | coding | downstream | 381046 | 30767138 ~ 30776858 (+) |
| G1536777 | NA | non-coding | upstream | 1218 | 30384417 ~ 30384647 (+) |
| G1536776 | NA | non-coding | upstream | 1888 | 30383748 ~ 30383977 (+) |
| G1536709 | NA | non-coding | upstream | 97729 | 30287835 ~ 30288136 (+) |
| G1536694 | NA | non-coding | upstream | 107865 | 30277797 ~ 30278000 (+) |
| G1536682 | NA | non-coding | upstream | 115171 | 30270419 ~ 30270694 (+) |
| G1536781 | NA | non-coding | downstream | 861 | 30386953 ~ 30387249 (+) |
| G1536783 | NA | non-coding | downstream | 1625 | 30387717 ~ 30387943 (+) |
| G1536847 | NA | non-coding | downstream | 83486 | 30469578 ~ 30491654 (+) |
| G1536830 | NA | non-coding | downstream | 110537 | 30496629 ~ 30498403 (+) |
| G1537049 | NA | non-coding | downstream | 163891 | 30549983 ~ 30550183 (+) |
| G1536720 | NA | other | upstream | 88519 | 30297131 ~ 30297346 (+) |
| G1534495 | NA | other | upstream | 1572762 | 28812829 ~ 28813103 (+) |
| G1534488 | LOC106574337 | other | upstream | 1581192 | 28804028 ~ 28804673 (+) |
| G1533121 | LOC106574322 | other | upstream | 2347389 | 27974813 ~ 28038476 (+) |
| G1537251 | NA | other | downstream | 436416 | 30822508 ~ 30828046 (+) |
| LOC110496006 | LOC106588175 | other | downstream | 1182799 | 31568375 ~ 31572239 (+) |
| LOC110496008 | LOC106588176 | other | downstream | 1192075 | 31578096 ~ 31580320 (+) |
| G1538208 | LOC106588182 | other | downstream | 1367618 | 31753710 ~ 31754191 (+) |
| G1539641 | NA | other | downstream | 2634136 | 33020228 ~ 33020544 (+) |
