Gene
RNA
| Item | Value |
|---|---|
| gene id | G1536962 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 30423059 ~ 30506111 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1759145 | True | 206 | lncRNA | 0.40 | 2 | 30423059 | 30506111 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495979 | LOC106574339 | coding | downstream | 26190 | 30317376 ~ 30396869 (-) |
| LOC110495975 | LOC106574338 | coding | downstream | 581460 | 29414177 ~ 29841599 (-) |
| LOC110495976 | NA | coding | downstream | 925587 | 29496293 ~ 29497472 (-) |
| LOC110496788 | gart | coding | downstream | 1148326 | 29253527 ~ 29274733 (-) |
| LOC110495974 | LOC106574337 | coding | downstream | 1617704 | 28771350 ~ 28805355 (-) |
| ndufv1 | LOC106588156 | coding | upstream | 100583 | 30606694 ~ 30612658 (-) |
| hcn3 | LOC106588157 | coding | upstream | 114619 | 30620730 ~ 30637860 (-) |
| LOC110496793 | LOC106588158 | coding | upstream | 138399 | 30644510 ~ 30649112 (-) |
| LOC110496794 | LOC106588158 | coding | upstream | 155490 | 30661601 ~ 30674549 (-) |
| LOC110495990 | hax1 | coding | upstream | 282000 | 30788111 ~ 30802586 (-) |
| G1536932 | NA | non-coding | downstream | 14889 | 30389023 ~ 30408170 (-) |
| G1536930 | NA | non-coding | downstream | 34875 | 30387939 ~ 30388184 (-) |
| G1536927 | NA | non-coding | downstream | 36727 | 30386037 ~ 30386332 (-) |
| G1536877 | NA | non-coding | downstream | 110399 | 30307668 ~ 30312660 (-) |
| G1536708 | NA | non-coding | downstream | 135797 | 30287055 ~ 30287262 (-) |
| G1537032 | NA | non-coding | upstream | 30255 | 30536366 ~ 30536579 (-) |
| G1537058 | NA | non-coding | upstream | 56897 | 30563008 ~ 30568315 (-) |
| G1537072 | NA | non-coding | upstream | 62308 | 30568419 ~ 30598012 (-) |
| G1537073 | NA | non-coding | upstream | 62528 | 30568639 ~ 30583563 (-) |
| G1537074 | NA | non-coding | upstream | 63353 | 30569464 ~ 30573116 (-) |
| G1536703 | NA | other | downstream | 138297 | 30284372 ~ 30284762 (-) |
| LOC110495963 | LOC106574327 | other | downstream | 2070441 | 28241494 ~ 28368147 (-) |
| LOC110495955 | LOC106574324 | other | downstream | 2386443 | 27995381 ~ 28092196 (-) |
| LOC110496785 | LOC106574363 | other | downstream | 2508539 | 27839770 ~ 27914607 (-) |
| LOC110495948 | LOC106574314 | other | downstream | 2624446 | 27754174 ~ 27798978 (-) |
| G1537022 | NA | other | upstream | 13781 | 30519892 ~ 30525373 (-) |
| G1537091 | NA | other | upstream | 96605 | 30602716 ~ 30603392 (-) |
| LOC110495992 | LOC106588166 | other | upstream | 405716 | 30911827 ~ 30955199 (-) |
| LOC110495994 | LOC106588168 | other | upstream | 505767 | 31008756 ~ 31014201 (-) |
| LOC110496004 | LOC106588173 | other | upstream | 1010000 | 31492852 ~ 31524883 (-) |
