Gene
RNA
| Item | Value |
|---|---|
| gene id | G1537059 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 30568505 ~ 30576383 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1759263 | False | 211 | lncRNA | 0.34 | 3 | 30568505 | 30574469 |
| TU1759264 | True | 461 | lncRNA | 0.34 | 2 | 30571905 | 30576383 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496792 | cars2 | coding | upstream | 28985 | 30535014 ~ 30539520 (+) |
| LOC118940974 | LOC108266561 | coding | upstream | 49063 | 30518620 ~ 30519442 (+) |
| cckbra | LOC106575124 | coding | upstream | 313601 | 30233691 ~ 30254904 (+) |
| zgc:174945 | LOC106574385 | coding | upstream | 382137 | 30182232 ~ 30186368 (+) |
| LOC110495972 | NA | coding | upstream | 1833276 | 28732589 ~ 28735229 (+) |
| LOC110495985 | LOC106588159 | coding | downstream | 150424 | 30726807 ~ 30749687 (+) |
| LOC110496795 | LOC106588160 | coding | downstream | 184184 | 30760567 ~ 30762897 (+) |
| znf687b | LOC106588162 | coding | downstream | 190755 | 30767138 ~ 30776858 (+) |
| LOC110495991 | cssa27h1orf43 | coding | downstream | 327641 | 30904024 ~ 30908524 (+) |
| LOC110495995 | she | coding | downstream | 440143 | 31016526 ~ 31033736 (+) |
| G1537049 | NA | non-coding | upstream | 18322 | 30549983 ~ 30550183 (+) |
| G1536830 | NA | non-coding | upstream | 70102 | 30496629 ~ 30498403 (+) |
| G1536847 | NA | non-coding | upstream | 76851 | 30469578 ~ 30491654 (+) |
| G1536783 | NA | non-coding | upstream | 180562 | 30387717 ~ 30387943 (+) |
| G1536781 | NA | non-coding | upstream | 181256 | 30386953 ~ 30387249 (+) |
| G1537065 | NA | non-coding | downstream | 1484 | 30577867 ~ 30597130 (+) |
| G1537066 | NA | non-coding | downstream | 5485 | 30581868 ~ 30585331 (+) |
| G1537067 | NA | non-coding | downstream | 6068 | 30582451 ~ 30598012 (+) |
| G1537068 | NA | non-coding | downstream | 10730 | 30587113 ~ 30596753 (+) |
| G1537069 | NA | non-coding | downstream | 10867 | 30587250 ~ 30591430 (+) |
| G1536720 | NA | other | upstream | 271159 | 30297131 ~ 30297346 (+) |
| G1534495 | NA | other | upstream | 1755402 | 28812829 ~ 28813103 (+) |
| G1534488 | LOC106574337 | other | upstream | 1763832 | 28804028 ~ 28804673 (+) |
| G1533121 | LOC106574322 | other | upstream | 2530029 | 27974813 ~ 28038476 (+) |
| G1537251 | NA | other | downstream | 246125 | 30822508 ~ 30828046 (+) |
| LOC110496006 | LOC106588175 | other | downstream | 992508 | 31568375 ~ 31572239 (+) |
| LOC110496008 | LOC106588176 | other | downstream | 1001784 | 31578096 ~ 31580320 (+) |
| G1538208 | LOC106588182 | other | downstream | 1177327 | 31753710 ~ 31754191 (+) |
| G1539641 | NA | other | downstream | 2443845 | 33020228 ~ 33020544 (+) |
