G1537082


Basic Information

Item Value
gene id G1537082
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 30588248 ~ 30593123 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1759301
tttccgattttttttccgatttttttccgatttttgtccgatttttttcgattttttccgaatttttttccctatttttcccgatttttttccgaatttttccgatttttttccgaaattttcccgatttttcccgattttttcccgatttttttccgattttttccgattttttcccgatttttttccgattttttcccgatttttccgatttttttctgatttttttccgatttttttgccgatttttttctgattttttcccgattttttcccgattttttcccgattttttcccgatttttttccgatttttttcccgatttttcccgatttttttcgattttttttcagattttttccgattttttttcagattttttttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1759301 True 386 lncRNA 0.30 2 30588248 30593123

Neighbor

gene id symbol gene type direction distance location
LOC110515180 NA coding downstream 86068 30498183 ~ 30502180 (-)
LOC110496791 cars2 coding downstream 90414 30489683 ~ 30497834 (-)
LOC110495980 irs2 coding downstream 112189 30456866 ~ 30476059 (-)
LOC110496790 lig4 coding downstream 146593 30417843 ~ 30441655 (-)
LOC110495979 LOC106574339 coding downstream 191379 30317376 ~ 30396869 (-)
ndufv1 LOC106588156 coding upstream 13571 30606694 ~ 30612658 (-)
hcn3 LOC106588157 coding upstream 27607 30620730 ~ 30637860 (-)
LOC110496793 LOC106588158 coding upstream 51387 30644510 ~ 30649112 (-)
LOC110496794 LOC106588158 coding upstream 68478 30661601 ~ 30674549 (-)
LOC110495990 hax1 coding upstream 194988 30788111 ~ 30802586 (-)
G1537073 NA non-coding downstream 4685 30568639 ~ 30583563 (-)
G1537079 NA non-coding downstream 5077 30580980 ~ 30583171 (-)
G1537076 NA non-coding downstream 8423 30573850 ~ 30579825 (-)
G1537075 NA non-coding downstream 14850 30570626 ~ 30573398 (-)
G1537074 NA non-coding downstream 15132 30569464 ~ 30573116 (-)
G1537140 NA non-coding upstream 46852 30639975 ~ 30640433 (-)
G1537170 NA non-coding upstream 95723 30688846 ~ 30689666 (-)
G1537172 NA non-coding upstream 97171 30690294 ~ 30690881 (-)
G1537194 NA non-coding upstream 110837 30703960 ~ 30704314 (-)
G1537631 NA non-coding upstream 128280 30721403 ~ 30721673 (-)
G1537022 NA other downstream 62875 30519892 ~ 30525373 (-)
G1536703 NA other downstream 303486 30284372 ~ 30284762 (-)
LOC110495963 LOC106574327 other downstream 2235630 28241494 ~ 28368147 (-)
LOC110495955 LOC106574324 other downstream 2551632 27995381 ~ 28092196 (-)
LOC110496785 LOC106574363 other downstream 2673728 27839770 ~ 27914607 (-)
G1537091 NA other upstream 9593 30602716 ~ 30603392 (-)
LOC110495992 LOC106588166 other upstream 318704 30911827 ~ 30955199 (-)
LOC110495994 LOC106588168 other upstream 418755 31008756 ~ 31014201 (-)
LOC110496004 LOC106588173 other upstream 922988 31492852 ~ 31524883 (-)
LOC100136047 LOC106605923 other upstream 1092629 31684840 ~ 31692733 (-)

Expression


Co-expression Network