G1537092


Basic Information

Item Value
gene id G1537092
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 30604005 ~ 30604225 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1759311
tctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatcactgacaaactgaaatggtccacacacacagacagtatggggaagaaggcacaacagcacctcttcaacctcaggaggcggaAAAACGTGGCTTGCCACCAAAAACCTTCACTACCTTTtacacaattgagagcattctgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1759311 True 221 lncRNA 0.47 1 30604005 30604225

Neighbor

gene id symbol gene type direction distance location
LOC110496792 cars2 coding upstream 64485 30535014 ~ 30539520 (+)
LOC118940974 LOC108266561 coding upstream 84563 30518620 ~ 30519442 (+)
cckbra LOC106575124 coding upstream 349101 30233691 ~ 30254904 (+)
zgc:174945 LOC106574385 coding upstream 417637 30182232 ~ 30186368 (+)
LOC110495972 NA coding upstream 1868776 28732589 ~ 28735229 (+)
LOC110495985 LOC106588159 coding downstream 122582 30726807 ~ 30749687 (+)
LOC110496795 LOC106588160 coding downstream 156342 30760567 ~ 30762897 (+)
znf687b LOC106588162 coding downstream 162913 30767138 ~ 30776858 (+)
LOC110495991 cssa27h1orf43 coding downstream 299799 30904024 ~ 30908524 (+)
LOC110495995 she coding downstream 412301 31016526 ~ 31033736 (+)
G1537067 NA non-coding upstream 5993 30582451 ~ 30598012 (+)
G1537065 NA non-coding upstream 6875 30577867 ~ 30597130 (+)
G1537068 NA non-coding upstream 7252 30587113 ~ 30596753 (+)
G1537070 NA non-coding upstream 8262 30594691 ~ 30595743 (+)
G1537069 NA non-coding upstream 12575 30587250 ~ 30591430 (+)
G1537093 NA non-coding downstream 501 30604726 ~ 30605036 (+)
G1537094 NA non-coding downstream 1247 30605472 ~ 30605804 (+)
G1537105 LOC106588157 non-coding downstream 19884 30624109 ~ 30625522 (+)
G1537169 NA non-coding downstream 85074 30689299 ~ 30689732 (+)
G1537171 NA non-coding downstream 86122 30690347 ~ 30690881 (+)
G1536720 NA other upstream 306659 30297131 ~ 30297346 (+)
G1534495 NA other upstream 1790902 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 1799332 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 2565529 27974813 ~ 28038476 (+)
G1537251 NA other downstream 218283 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 964666 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 973942 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 1149485 31753710 ~ 31754191 (+)
G1539641 NA other downstream 2416003 33020228 ~ 33020544 (+)

Expression


Co-expression Network