G1537093


Basic Information

Item Value
gene id G1537093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 30604726 ~ 30605036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1759312
gtgtatttggttttgttgtggaattgttagatattatctcttagatactgctgcactgtcagctctagaagcataagcatttctctacactcgcaataacatctgctgtgaccaataaaatttgatttgatttccaccggtccaatgtgcattgctcatgtttcttggcccaagcaagtattttcttcttattggtgtcctttagtagtgatttcttcacagcaattcgaccacgaaggacTGATTCActatctcctctgaacagttgatgttgagatgtctgttacttgatctctttgaagcatttattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1759312 True 311 lncRNA 0.38 1 30604726 30605036

Neighbor

gene id symbol gene type direction distance location
LOC110496792 cars2 coding upstream 65206 30535014 ~ 30539520 (+)
LOC118940974 LOC108266561 coding upstream 85284 30518620 ~ 30519442 (+)
cckbra LOC106575124 coding upstream 349822 30233691 ~ 30254904 (+)
zgc:174945 LOC106574385 coding upstream 418358 30182232 ~ 30186368 (+)
LOC110495972 NA coding upstream 1869497 28732589 ~ 28735229 (+)
LOC110495985 LOC106588159 coding downstream 121771 30726807 ~ 30749687 (+)
LOC110496795 LOC106588160 coding downstream 155531 30760567 ~ 30762897 (+)
znf687b LOC106588162 coding downstream 162102 30767138 ~ 30776858 (+)
LOC110495991 cssa27h1orf43 coding downstream 298988 30904024 ~ 30908524 (+)
LOC110495995 she coding downstream 411490 31016526 ~ 31033736 (+)
G1537092 NA non-coding upstream 501 30604005 ~ 30604225 (+)
G1537067 NA non-coding upstream 6714 30582451 ~ 30598012 (+)
G1537065 NA non-coding upstream 7596 30577867 ~ 30597130 (+)
G1537068 NA non-coding upstream 7973 30587113 ~ 30596753 (+)
G1537070 NA non-coding upstream 8983 30594691 ~ 30595743 (+)
G1537094 NA non-coding downstream 436 30605472 ~ 30605804 (+)
G1537105 LOC106588157 non-coding downstream 19073 30624109 ~ 30625522 (+)
G1537169 NA non-coding downstream 84263 30689299 ~ 30689732 (+)
G1537171 NA non-coding downstream 85311 30690347 ~ 30690881 (+)
G1537193 NA non-coding downstream 98935 30703971 ~ 30704311 (+)
G1536720 NA other upstream 307380 30297131 ~ 30297346 (+)
G1534495 NA other upstream 1791623 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 1800053 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 2566250 27974813 ~ 28038476 (+)
G1537251 NA other downstream 217472 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 963855 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 973131 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 1148674 31753710 ~ 31754191 (+)
G1539641 NA other downstream 2415192 33020228 ~ 33020544 (+)

Expression


Co-expression Network