G1537094


Basic Information

Item Value
gene id G1537094
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 30605472 ~ 30605804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1759313
ggttaagagaatgccaagagtgtgcaaagctgtcatcaaggcaaagggtggctactttgaagaatctcaaatatattttgattcaagacttttttggttacaacatgtcatatgtgttatttcatagtttcgatgtcttcactattattccacactgtagaaaatagtaaacaaagaaaaaccctggaaggaGTAGAtctgtccaaacctttgactggtactgtaggtagcTAGCAATATAGCTTCTTTGCAAAAAAGACTTAGCCTAGTATTCATGGCACACTATAAATATCTGACTGCTACTAGGAAAGTATTCTGTACAAGACTAAATAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1759313 True 333 lncRNA 0.36 1 30605472 30605804

Neighbor

gene id symbol gene type direction distance location
LOC110496792 cars2 coding upstream 65952 30535014 ~ 30539520 (+)
LOC118940974 LOC108266561 coding upstream 86030 30518620 ~ 30519442 (+)
cckbra LOC106575124 coding upstream 350568 30233691 ~ 30254904 (+)
zgc:174945 LOC106574385 coding upstream 419104 30182232 ~ 30186368 (+)
LOC110495972 NA coding upstream 1870243 28732589 ~ 28735229 (+)
LOC110495985 LOC106588159 coding downstream 121003 30726807 ~ 30749687 (+)
LOC110496795 LOC106588160 coding downstream 154763 30760567 ~ 30762897 (+)
znf687b LOC106588162 coding downstream 161334 30767138 ~ 30776858 (+)
LOC110495991 cssa27h1orf43 coding downstream 298220 30904024 ~ 30908524 (+)
LOC110495995 she coding downstream 410722 31016526 ~ 31033736 (+)
G1537093 NA non-coding upstream 436 30604726 ~ 30605036 (+)
G1537092 NA non-coding upstream 1247 30604005 ~ 30604225 (+)
G1537067 NA non-coding upstream 7460 30582451 ~ 30598012 (+)
G1537105 LOC106588157 non-coding downstream 18305 30624109 ~ 30625522 (+)
G1537169 NA non-coding downstream 83495 30689299 ~ 30689732 (+)
G1537171 NA non-coding downstream 84543 30690347 ~ 30690881 (+)
G1537193 NA non-coding downstream 98167 30703971 ~ 30704311 (+)
G1537206 NA non-coding downstream 112135 30717939 ~ 30718178 (+)
G1536720 NA other upstream 308126 30297131 ~ 30297346 (+)
G1534495 NA other upstream 1792369 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 1800799 28804028 ~ 28804673 (+)
G1533121 LOC106574322 other upstream 2566996 27974813 ~ 28038476 (+)
G1537251 NA other downstream 216704 30822508 ~ 30828046 (+)
LOC110496006 LOC106588175 other downstream 963087 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 other downstream 972363 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 1147906 31753710 ~ 31754191 (+)
G1539641 NA other downstream 2414424 33020228 ~ 33020544 (+)

Expression


Co-expression Network