Gene
RNA
| Item | Value |
|---|---|
| gene id | G1537194 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 30703960 ~ 30704314 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: piggyBac transposable element-derived protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1759422 | True | 272 | lncRNA | 0.39 | 2 | 30703960 | 30704314 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496794 | LOC106588158 | coding | downstream | 29411 | 30661601 ~ 30674549 (-) |
| LOC110496793 | LOC106588158 | coding | downstream | 54848 | 30644510 ~ 30649112 (-) |
| hcn3 | LOC106588157 | coding | downstream | 66100 | 30620730 ~ 30637860 (-) |
| ndufv1 | LOC106588156 | coding | downstream | 91302 | 30606694 ~ 30612658 (-) |
| LOC110515180 | NA | coding | downstream | 201780 | 30498183 ~ 30502180 (-) |
| LOC110495990 | hax1 | coding | upstream | 83797 | 30788111 ~ 30802586 (-) |
| ubap2l | ubap2l | coding | upstream | 98869 | 30803183 ~ 30896875 (-) |
| LOC110495992 | LOC106588166 | coding | upstream | 208267 | 30911827 ~ 30955199 (-) |
| cgnb | LOC106588167 | coding | upstream | 254860 | 30959174 ~ 31005856 (-) |
| LOC110495994 | LOC106588168 | coding | upstream | 304442 | 31008756 ~ 31014201 (-) |
| G1537172 | NA | non-coding | downstream | 13079 | 30690294 ~ 30690881 (-) |
| G1537170 | NA | non-coding | downstream | 14294 | 30688846 ~ 30689666 (-) |
| G1537140 | NA | non-coding | downstream | 63527 | 30639975 ~ 30640433 (-) |
| G1537077 | NA | non-coding | downstream | 105783 | 30576856 ~ 30598177 (-) |
| G1537631 | NA | non-coding | upstream | 17089 | 30721403 ~ 30721673 (-) |
| G1537617 | NA | non-coding | upstream | 80623 | 30784937 ~ 30786210 (-) |
| G1537686 | NA | non-coding | upstream | 187454 | 30891768 ~ 30892048 (-) |
| G1537700 | cssa27h1orf43 | non-coding | upstream | 201246 | 30905560 ~ 30905854 (-) |
| G1537696 | NA | non-coding | upstream | 205097 | 30909411 ~ 30911711 (-) |
| G1537091 | NA | other | downstream | 100568 | 30602716 ~ 30603392 (-) |
| G1537022 | NA | other | downstream | 178587 | 30519892 ~ 30525373 (-) |
| G1536703 | NA | other | downstream | 419198 | 30284372 ~ 30284762 (-) |
| LOC110495963 | LOC106574327 | other | downstream | 2351342 | 28241494 ~ 28368147 (-) |
| LOC110495955 | LOC106574324 | other | downstream | 2667344 | 27995381 ~ 28092196 (-) |
| LOC110496004 | LOC106588173 | other | upstream | 811797 | 31492852 ~ 31524883 (-) |
| LOC100136047 | LOC106605923 | other | upstream | 981438 | 31684840 ~ 31692733 (-) |
| G1538595 | NA | other | upstream | 1010192 | 31714506 ~ 31715181 (-) |
