Gene
RNA
| Item | Value |
|---|---|
| gene id | G1537314 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 30955106 ~ 30965748 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cingulin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1759561 | True | 244 | lncRNA | 0.59 | 2 | 30955106 | 30965748 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495991 | cssa27h1orf43 | coding | upstream | 46582 | 30904024 ~ 30908524 (+) |
| znf687b | LOC106588162 | coding | upstream | 178248 | 30767138 ~ 30776858 (+) |
| LOC110496795 | LOC106588160 | coding | upstream | 192209 | 30760567 ~ 30762897 (+) |
| LOC110495985 | LOC106588159 | coding | upstream | 205419 | 30726807 ~ 30749687 (+) |
| LOC110496792 | cars2 | coding | upstream | 415586 | 30535014 ~ 30539520 (+) |
| LOC110495995 | she | coding | downstream | 50778 | 31016526 ~ 31033736 (+) |
| LOC110496000 | LOC106570108 | coding | downstream | 151166 | 31116914 ~ 31126108 (+) |
| LOC110496001 | NA | coding | downstream | 177377 | 31143125 ~ 31159895 (+) |
| LOC110496002 | LOC106588171 | coding | downstream | 288438 | 31254186 ~ 31358812 (+) |
| LOC110496003 | LOC106588172 | coding | downstream | 464557 | 31430305 ~ 31443574 (+) |
| G1537273 | NA | non-coding | upstream | 98461 | 30855049 ~ 30856645 (+) |
| G1537226 | NA | non-coding | upstream | 191771 | 30763055 ~ 30763335 (+) |
| G1537216 | NA | non-coding | upstream | 211854 | 30742711 ~ 30743252 (+) |
| G1537208 | NA | non-coding | upstream | 234938 | 30719926 ~ 30720168 (+) |
| G1537206 | NA | non-coding | upstream | 236928 | 30717939 ~ 30718178 (+) |
| G1537364 | NA | non-coding | downstream | 60260 | 31026008 ~ 31026210 (+) |
| G1537366 | NA | non-coding | downstream | 63730 | 31029478 ~ 31029683 (+) |
| G1537367 | NA | non-coding | downstream | 63986 | 31029734 ~ 31029941 (+) |
| G1537368 | NA | non-coding | downstream | 64707 | 31030455 ~ 31030672 (+) |
| G1537251 | NA | other | upstream | 127060 | 30822508 ~ 30828046 (+) |
| G1536720 | NA | other | upstream | 657760 | 30297131 ~ 30297346 (+) |
| G1534495 | NA | other | upstream | 2142003 | 28812829 ~ 28813103 (+) |
| G1534488 | LOC106574337 | other | upstream | 2150433 | 28804028 ~ 28804673 (+) |
| LOC110495972 | NA | other | upstream | 2219878 | 28732589 ~ 28735229 (+) |
| LOC110496006 | LOC106588175 | other | downstream | 603143 | 31568375 ~ 31572239 (+) |
| LOC110496008 | LOC106588176 | other | downstream | 612419 | 31578096 ~ 31580320 (+) |
| G1538208 | LOC106588182 | other | downstream | 787962 | 31753710 ~ 31754191 (+) |
| G1539641 | NA | other | downstream | 2054480 | 33020228 ~ 33020544 (+) |
| G1539671 | LOC106582599 | other | downstream | 2093242 | 33058990 ~ 33059857 (+) |
