G1537379


Basic Information

Item Value
gene id G1537379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 31044333 ~ 31044561 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1759649
ggatagcacctctgtaaacaaagagagaaaagcatatttcaaccctgcaggtgcgacacaaaacgcataaataaaaatataattcatgccttacctttgacgagcttcttttgttggcactccaatatgtcccataaacatcacaaatggtccttttgttcgattaattccgttgatatatccaaaatgtccatttatttggcgcgtttgatccagaaaaccaccggtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1759649 True 229 lncRNA 0.38 1 31044333 31044561

Neighbor

gene id symbol gene type direction distance location
LOC110495995 she coding upstream 10597 31016526 ~ 31033736 (+)
LOC110495991 cssa27h1orf43 coding upstream 135809 30904024 ~ 30908524 (+)
znf687b LOC106588162 coding upstream 267475 30767138 ~ 30776858 (+)
LOC110496795 LOC106588160 coding upstream 281436 30760567 ~ 30762897 (+)
LOC110495985 LOC106588159 coding upstream 294646 30726807 ~ 30749687 (+)
LOC110496000 LOC106570108 coding downstream 72353 31116914 ~ 31126108 (+)
LOC110496001 NA coding downstream 98564 31143125 ~ 31159895 (+)
LOC110496002 LOC106588171 coding downstream 209625 31254186 ~ 31358812 (+)
LOC110496003 LOC106588172 coding downstream 385744 31430305 ~ 31443574 (+)
LOC110496006 LOC106588175 coding downstream 524065 31568375 ~ 31572239 (+)
G1537368 NA non-coding upstream 13661 31030455 ~ 31030672 (+)
G1537367 NA non-coding upstream 14392 31029734 ~ 31029941 (+)
G1537366 NA non-coding upstream 14650 31029478 ~ 31029683 (+)
G1537364 NA non-coding upstream 18123 31026008 ~ 31026210 (+)
G1537380 NA non-coding downstream 164 31044725 ~ 31045155 (+)
G1537382 NA non-coding downstream 4069 31048630 ~ 31049824 (+)
G1537383 NA non-coding downstream 5364 31049925 ~ 31050225 (+)
G1537350 NA non-coding downstream 9490 31054051 ~ 31055891 (+)
G1537400 NA non-coding downstream 32574 31077135 ~ 31077509 (+)
G1537251 NA other upstream 216287 30822508 ~ 30828046 (+)
G1536720 NA other upstream 746987 30297131 ~ 30297346 (+)
G1534495 NA other upstream 2231230 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 2239660 28804028 ~ 28804673 (+)
LOC110495972 NA other upstream 2309105 28732589 ~ 28735229 (+)
LOC110496008 LOC106588176 other downstream 533606 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 709149 31753710 ~ 31754191 (+)
G1539641 NA other downstream 1975667 33020228 ~ 33020544 (+)
G1539671 LOC106582599 other downstream 2014429 33058990 ~ 33059857 (+)

Expression


Co-expression Network