Gene
RNA
| Item | Value |
|---|---|
| gene id | G1537383 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 31049925 ~ 31050225 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein S100-A1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1759653 | True | 301 | lncRNA | 0.52 | 1 | 31049925 | 31050225 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495995 | she | coding | upstream | 16189 | 31016526 ~ 31033736 (+) |
| LOC110495991 | cssa27h1orf43 | coding | upstream | 141401 | 30904024 ~ 30908524 (+) |
| znf687b | LOC106588162 | coding | upstream | 273067 | 30767138 ~ 30776858 (+) |
| LOC110496795 | LOC106588160 | coding | upstream | 287028 | 30760567 ~ 30762897 (+) |
| LOC110495985 | LOC106588159 | coding | upstream | 300238 | 30726807 ~ 30749687 (+) |
| LOC110496000 | LOC106570108 | coding | downstream | 66689 | 31116914 ~ 31126108 (+) |
| LOC110496001 | NA | coding | downstream | 92900 | 31143125 ~ 31159895 (+) |
| LOC110496002 | LOC106588171 | coding | downstream | 203961 | 31254186 ~ 31358812 (+) |
| LOC110496003 | LOC106588172 | coding | downstream | 380080 | 31430305 ~ 31443574 (+) |
| LOC110496006 | LOC106588175 | coding | downstream | 518401 | 31568375 ~ 31572239 (+) |
| G1537382 | NA | non-coding | upstream | 101 | 31048630 ~ 31049824 (+) |
| G1537380 | NA | non-coding | upstream | 4770 | 31044725 ~ 31045155 (+) |
| G1537379 | NA | non-coding | upstream | 5364 | 31044333 ~ 31044561 (+) |
| G1537368 | NA | non-coding | upstream | 19253 | 31030455 ~ 31030672 (+) |
| G1537350 | NA | non-coding | downstream | 3826 | 31054051 ~ 31055891 (+) |
| G1537400 | NA | non-coding | downstream | 26910 | 31077135 ~ 31077509 (+) |
| G1537401 | NA | non-coding | downstream | 27770 | 31077995 ~ 31078239 (+) |
| G1537402 | NA | non-coding | downstream | 28111 | 31078336 ~ 31078662 (+) |
| G1537251 | NA | other | upstream | 221879 | 30822508 ~ 30828046 (+) |
| G1536720 | NA | other | upstream | 752579 | 30297131 ~ 30297346 (+) |
| G1534495 | NA | other | upstream | 2236822 | 28812829 ~ 28813103 (+) |
| G1534488 | LOC106574337 | other | upstream | 2245252 | 28804028 ~ 28804673 (+) |
| LOC110495972 | NA | other | upstream | 2314697 | 28732589 ~ 28735229 (+) |
| LOC110496008 | LOC106588176 | other | downstream | 527942 | 31578096 ~ 31580320 (+) |
| G1538208 | LOC106588182 | other | downstream | 703485 | 31753710 ~ 31754191 (+) |
| G1539641 | NA | other | downstream | 1970003 | 33020228 ~ 33020544 (+) |
| G1539671 | LOC106582599 | other | downstream | 2008765 | 33058990 ~ 33059857 (+) |
