G1537401


Basic Information

Item Value
gene id G1537401
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 31077995 ~ 31078239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1759671
gtgcactacttatgaccattTACCTTAACAAAAGCAAGTAGTTGAGAGGCCACCAGGCTGCTGAACTCCTCTTTGTTCAGGGTGTTTGAGGATCCATCATTCCCAGCAAAGGTCTTGAACTGGGAGACAACTACGTTGATGACAGAGTCCATTGTATTGATTCAATATGGAGTGACTGCAAATACATGCGAAATAAACAAGTCTGCTTATAAAGTCTACATGTTACATTTATATCCATTGTAGAG

Function

NR:

description
PREDICTED: protein S100-A11-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1759671 True 245 lncRNA 0.40 1 31077995 31078239

Neighbor

gene id symbol gene type direction distance location
LOC110495995 she coding upstream 44259 31016526 ~ 31033736 (+)
LOC110495991 cssa27h1orf43 coding upstream 169471 30904024 ~ 30908524 (+)
znf687b LOC106588162 coding upstream 301137 30767138 ~ 30776858 (+)
LOC110496795 LOC106588160 coding upstream 315098 30760567 ~ 30762897 (+)
LOC110495985 LOC106588159 coding upstream 328308 30726807 ~ 30749687 (+)
LOC110496000 LOC106570108 coding downstream 38675 31116914 ~ 31126108 (+)
LOC110496001 NA coding downstream 64886 31143125 ~ 31159895 (+)
LOC110496002 LOC106588171 coding downstream 175947 31254186 ~ 31358812 (+)
LOC110496003 LOC106588172 coding downstream 352066 31430305 ~ 31443574 (+)
LOC110496006 LOC106588175 coding downstream 490387 31568375 ~ 31572239 (+)
G1537400 NA non-coding upstream 486 31077135 ~ 31077509 (+)
G1537350 NA non-coding upstream 22104 31054051 ~ 31055891 (+)
G1537383 NA non-coding upstream 27770 31049925 ~ 31050225 (+)
G1537382 NA non-coding upstream 28171 31048630 ~ 31049824 (+)
G1537380 NA non-coding upstream 32840 31044725 ~ 31045155 (+)
G1537402 NA non-coding downstream 97 31078336 ~ 31078662 (+)
G1537587 NA non-coding downstream 295182 31373421 ~ 31373638 (+)
G1537589 NA non-coding downstream 297604 31375843 ~ 31376096 (+)
G1537590 NA non-coding downstream 298051 31376290 ~ 31376547 (+)
G1537251 NA other upstream 249949 30822508 ~ 30828046 (+)
G1536720 NA other upstream 780649 30297131 ~ 30297346 (+)
G1534495 NA other upstream 2264892 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 2273322 28804028 ~ 28804673 (+)
LOC110495972 NA other upstream 2342767 28732589 ~ 28735229 (+)
LOC110496008 LOC106588176 other downstream 499928 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 675471 31753710 ~ 31754191 (+)
G1539641 NA other downstream 1941989 33020228 ~ 33020544 (+)
G1539671 LOC106582599 other downstream 1980751 33058990 ~ 33059857 (+)

Expression


Co-expression Network