G1537402


Basic Information

Item Value
gene id G1537402
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 31078336 ~ 31078662 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1759672
TATTCATCCCACCTCGTGAGGTATGGTCTGGTTGCAGCAGCCAGCAGGTGTGGAGAATCGTCATCTCTCCACTCTTTCCTTTTCTTTCTCCATCCTGTTCACTATGTAGCTCGGCCTAGTGAGGAGGCCCAGTATTAGAGCCTCTGGCTGACCACGTGTTTGTGGGATGTAGAATGATAGGTATGACAGCCTCTGCGGGTTTAAAGTGTTGGACAGAAAACATCCATCATTACTGACTGTTTTACTAATCAGTTCATCTGGTCAGGATCTGTCCAGTCACTCATAGGTTACGCACCCTATTCCCCGTTTAGGCCATTTGtataggac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1759672 True 327 lncRNA 0.48 1 31078336 31078662

Neighbor

gene id symbol gene type direction distance location
LOC110495995 she coding upstream 44600 31016526 ~ 31033736 (+)
LOC110495991 cssa27h1orf43 coding upstream 169812 30904024 ~ 30908524 (+)
znf687b LOC106588162 coding upstream 301478 30767138 ~ 30776858 (+)
LOC110496795 LOC106588160 coding upstream 315439 30760567 ~ 30762897 (+)
LOC110495985 LOC106588159 coding upstream 328649 30726807 ~ 30749687 (+)
LOC110496000 LOC106570108 coding downstream 38252 31116914 ~ 31126108 (+)
LOC110496001 NA coding downstream 64463 31143125 ~ 31159895 (+)
LOC110496002 LOC106588171 coding downstream 175524 31254186 ~ 31358812 (+)
LOC110496003 LOC106588172 coding downstream 351643 31430305 ~ 31443574 (+)
LOC110496006 LOC106588175 coding downstream 489964 31568375 ~ 31572239 (+)
G1537401 NA non-coding upstream 97 31077995 ~ 31078239 (+)
G1537400 NA non-coding upstream 827 31077135 ~ 31077509 (+)
G1537350 NA non-coding upstream 22445 31054051 ~ 31055891 (+)
G1537383 NA non-coding upstream 28111 31049925 ~ 31050225 (+)
G1537382 NA non-coding upstream 28512 31048630 ~ 31049824 (+)
G1537587 NA non-coding downstream 294759 31373421 ~ 31373638 (+)
G1537589 NA non-coding downstream 297181 31375843 ~ 31376096 (+)
G1537590 NA non-coding downstream 297628 31376290 ~ 31376547 (+)
G1537602 NA non-coding downstream 309532 31388194 ~ 31388423 (+)
G1537251 NA other upstream 250290 30822508 ~ 30828046 (+)
G1536720 NA other upstream 780990 30297131 ~ 30297346 (+)
G1534495 NA other upstream 2265233 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 2273663 28804028 ~ 28804673 (+)
LOC110495972 NA other upstream 2343108 28732589 ~ 28735229 (+)
LOC110496008 LOC106588176 other downstream 499505 31578096 ~ 31580320 (+)
G1538208 LOC106588182 other downstream 675048 31753710 ~ 31754191 (+)
G1539641 NA other downstream 1941566 33020228 ~ 33020544 (+)
G1539671 LOC106582599 other downstream 1980328 33058990 ~ 33059857 (+)

Expression


Co-expression Network