G1537979


Basic Information

Item Value
gene id G1537979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 31412939 ~ 31413242 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1760285
ttcctgatgggccacccccaggtggtaagggtaggtaacaacacatccgccacactgatccccaacacaggggcccctcaggggtgcgtggtcacccctcctgtactccctgttcactcatgactgcacggccaggcacgactccaacaccatcattaagttttctgatgacacaacagtggtaggcctgatcacccacaacgatgagacagcctatagggaggaggtcagagacctgaccatgtggtgcaaggacaacaacttctccctcaacgtgatcaagacaaaggagatgattgtggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1760285 True 304 lncRNA 0.55 1 31412939 31413242

Neighbor

gene id symbol gene type direction distance location
LOC110496002 LOC106588171 coding upstream 54127 31254186 ~ 31358812 (+)
LOC110496001 NA coding upstream 253044 31143125 ~ 31159895 (+)
LOC110496000 LOC106570108 coding upstream 286831 31116914 ~ 31126108 (+)
LOC110495995 she coding upstream 379203 31016526 ~ 31033736 (+)
LOC110495991 cssa27h1orf43 coding upstream 504415 30904024 ~ 30908524 (+)
LOC110496003 LOC106588172 coding downstream 17063 31430305 ~ 31443574 (+)
LOC110496006 LOC106588175 coding downstream 155384 31568375 ~ 31572239 (+)
LOC110496008 LOC106588176 coding downstream 164854 31578096 ~ 31580320 (+)
LOC110496010 LOC106588177 coding downstream 173686 31586928 ~ 31658119 (+)
LOC110496011 LOC106588179 coding downstream 245236 31658478 ~ 31696797 (+)
G1537602 NA non-coding upstream 24516 31388194 ~ 31388423 (+)
G1537590 NA non-coding upstream 36392 31376290 ~ 31376547 (+)
G1537589 NA non-coding upstream 36843 31375843 ~ 31376096 (+)
G1537587 NA non-coding upstream 39301 31373421 ~ 31373638 (+)
G1537992 NA non-coding downstream 3603 31416845 ~ 31417048 (+)
G1537995 NA non-coding downstream 8178 31421420 ~ 31421654 (+)
G1537997 NA non-coding downstream 9180 31422422 ~ 31422621 (+)
G1537999 NA non-coding downstream 9864 31423106 ~ 31423320 (+)
G1538028 NA non-coding downstream 41706 31454948 ~ 31455385 (+)
G1537251 NA other upstream 584893 30822508 ~ 30828046 (+)
G1536720 NA other upstream 1115593 30297131 ~ 30297346 (+)
G1534495 NA other upstream 2599836 28812829 ~ 28813103 (+)
G1534488 LOC106574337 other upstream 2608266 28804028 ~ 28804673 (+)
LOC110495972 NA other upstream 2677711 28732589 ~ 28735229 (+)
G1538208 LOC106588182 other downstream 340468 31753710 ~ 31754191 (+)
G1539641 NA other downstream 1606986 33020228 ~ 33020544 (+)
G1539671 LOC106582599 other downstream 1645748 33058990 ~ 33059857 (+)

Expression


Co-expression Network