Gene
RNA
| Item | Value |
|---|---|
| gene id | G1538000 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 31423178 ~ 31423392 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1760306 | True | 215 | lncRNA | 0.42 | 1 | 31423178 | 31423392 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495998 | LOC106588170 | coding | downstream | 326895 | 31090655 ~ 31096283 (-) |
| LOC110495999 | NA | coding | downstream | 337735 | 31077176 ~ 31085443 (-) |
| LOC110495997 | LOC106570110 | coding | downstream | 347422 | 31059021 ~ 31075756 (-) |
| LOC110496925 | LOC106588148 | coding | downstream | 371515 | 31048590 ~ 31051663 (-) |
| LOC110495994 | LOC106588168 | coding | downstream | 408977 | 31008756 ~ 31014201 (-) |
| LOC110496926 | NA | coding | upstream | 35445 | 31458837 ~ 31459087 (-) |
| LOC110496004 | LOC106588173 | coding | upstream | 69460 | 31492852 ~ 31524883 (-) |
| LOC110496005 | s10a4 | coding | upstream | 107012 | 31530404 ~ 31535376 (-) |
| LOC110496009 | LOC106588178 | coding | upstream | 205471 | 31628863 ~ 31654236 (-) |
| LOC100136047 | LOC106605923 | coding | upstream | 261448 | 31684840 ~ 31692733 (-) |
| G1537998 | NA | non-coding | downstream | 104 | 31422846 ~ 31423074 (-) |
| G1537956 | NA | non-coding | downstream | 35976 | 31386999 ~ 31387202 (-) |
| G1537931 | NA | non-coding | downstream | 64456 | 31356203 ~ 31358722 (-) |
| G1537824 | NA | non-coding | downstream | 170399 | 31197652 ~ 31252779 (-) |
| G1537844 | NA | non-coding | downstream | 192883 | 31226253 ~ 31230295 (-) |
| G1538004 | NA | non-coding | upstream | 3944 | 31427336 ~ 31427605 (-) |
| G1538412 | NA | non-coding | upstream | 26019 | 31449411 ~ 31449674 (-) |
| G1538416 | NA | non-coding | upstream | 31243 | 31454635 ~ 31454963 (-) |
| G1538417 | NA | non-coding | upstream | 31583 | 31454975 ~ 31455445 (-) |
| G1538423 | NA | non-coding | upstream | 36994 | 31460386 ~ 31460585 (-) |
| LOC110495992 | LOC106588166 | other | downstream | 469870 | 30911827 ~ 30955199 (-) |
| G1537091 | NA | other | downstream | 819786 | 30602716 ~ 30603392 (-) |
| G1537022 | NA | other | downstream | 897805 | 30519892 ~ 30525373 (-) |
| G1536703 | NA | other | downstream | 1138416 | 30284372 ~ 30284762 (-) |
| G1538595 | NA | other | upstream | 291114 | 31714506 ~ 31715181 (-) |
| atp5if1a | LOC106588193 | other | upstream | 633919 | 32057280 ~ 32058819 (-) |
| G1539348 | NA | other | upstream | 1138334 | 32561726 ~ 32562120 (-) |
