G1538423



Basic Information


Item Value
gene id G1538423
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 31460386 ~ 31460585 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1760788
AGCCCATAGAATGGGGTGGTGCAATACTGAATTAGTCATATTTTGATAAGGTGTATGCATGGGGATGTCCACGTCACCCAGAGATATGCCCATGCTGTAGAGATAGACCTAGCGGACTGAAACTTCACTGGTATAGGCATAATACAGCTAGTGCTATCTAGACTTACACTGGCAAACACATCCATTACATTAGCTACTTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1760788 True 200 lncRNA 0.43 1 31460386 31460585

Neighbor


gene id symbol gene type direction distance location
LOC110496926 NA coding downstream 1299 31458837 ~ 31459087 (-)
LOC110495998 LOC106588170 coding downstream 364103 31090655 ~ 31096283 (-)
LOC110495999 NA coding downstream 374943 31077176 ~ 31085443 (-)
LOC110495997 LOC106570110 coding downstream 384630 31059021 ~ 31075756 (-)
LOC110496925 LOC106588148 coding downstream 408723 31048590 ~ 31051663 (-)
LOC110496004 LOC106588173 coding upstream 32267 31492852 ~ 31524883 (-)
LOC110496005 s10a4 coding upstream 69819 31530404 ~ 31535376 (-)
LOC110496009 LOC106588178 coding upstream 168278 31628863 ~ 31654236 (-)
LOC100136047 LOC106605923 coding upstream 224255 31684840 ~ 31692733 (-)
ash1l LOC106588182 coding upstream 261929 31722514 ~ 31769106 (-)
G1538417 NA non-coding downstream 4941 31454975 ~ 31455445 (-)
G1538416 NA non-coding downstream 5423 31454635 ~ 31454963 (-)
G1538412 NA non-coding downstream 10712 31449411 ~ 31449674 (-)
G1538004 NA non-coding downstream 32781 31427336 ~ 31427605 (-)
G1538000 NA non-coding downstream 36994 31423178 ~ 31423392 (-)
G1538459 NA non-coding upstream 65747 31526332 ~ 31526533 (-)
G1538462 NA non-coding upstream 75148 31535733 ~ 31551223 (-)
G1538475 NA non-coding upstream 94160 31554745 ~ 31554966 (-)
G1538482 NA non-coding upstream 101527 31562112 ~ 31562408 (-)
G1538487 LOC106588175 non-coding upstream 108368 31568953 ~ 31571449 (-)
LOC110495994 LOC106588168 other downstream 446210 31008756 ~ 31014201 (-)
LOC110495992 LOC106588166 other downstream 507078 30911827 ~ 30955199 (-)
G1537091 NA other downstream 856994 30602716 ~ 30603392 (-)
G1537022 NA other downstream 935013 30519892 ~ 30525373 (-)
G1536703 NA other downstream 1175624 30284372 ~ 30284762 (-)
G1538595 NA other upstream 253921 31714506 ~ 31715181 (-)
atp5if1a LOC106588193 other upstream 596726 32057280 ~ 32058819 (-)
G1539348 NA other upstream 1101141 32561726 ~ 32562120 (-)

Expression



Co-expression Network