Gene
RNA
| Item | Value |
|---|---|
| gene id | G1538459 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 31526332 ~ 31526533 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ORF2 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1760827 | True | 202 | lncRNA | 0.39 | 1 | 31526332 | 31526533 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496004 | LOC106588173 | coding | downstream | 1449 | 31492852 ~ 31524883 (-) |
| LOC110496926 | NA | coding | downstream | 67245 | 31458837 ~ 31459087 (-) |
| LOC110495998 | LOC106588170 | coding | downstream | 430049 | 31090655 ~ 31096283 (-) |
| LOC110495999 | NA | coding | downstream | 440889 | 31077176 ~ 31085443 (-) |
| LOC110495997 | LOC106570110 | coding | downstream | 450576 | 31059021 ~ 31075756 (-) |
| LOC110496005 | s10a4 | coding | upstream | 3871 | 31530404 ~ 31535376 (-) |
| LOC110496009 | LOC106588178 | coding | upstream | 102330 | 31628863 ~ 31654236 (-) |
| LOC100136047 | LOC106605923 | coding | upstream | 158307 | 31684840 ~ 31692733 (-) |
| ash1l | LOC106588182 | coding | upstream | 195981 | 31722514 ~ 31769106 (-) |
| LOC110496013 | LOC106588183 | coding | upstream | 245079 | 31771612 ~ 31777330 (-) |
| G1538423 | NA | non-coding | downstream | 65747 | 31460386 ~ 31460585 (-) |
| G1538417 | NA | non-coding | downstream | 70887 | 31454975 ~ 31455445 (-) |
| G1538416 | NA | non-coding | downstream | 71369 | 31454635 ~ 31454963 (-) |
| G1538412 | NA | non-coding | downstream | 76658 | 31449411 ~ 31449674 (-) |
| G1538004 | NA | non-coding | downstream | 98727 | 31427336 ~ 31427605 (-) |
| G1538462 | NA | non-coding | upstream | 9200 | 31535733 ~ 31551223 (-) |
| G1538475 | NA | non-coding | upstream | 28212 | 31554745 ~ 31554966 (-) |
| G1538482 | NA | non-coding | upstream | 35579 | 31562112 ~ 31562408 (-) |
| G1538487 | LOC106588175 | non-coding | upstream | 42420 | 31568953 ~ 31571449 (-) |
| G1538490 | NA | non-coding | upstream | 49782 | 31576315 ~ 31576538 (-) |
| LOC110495994 | LOC106588168 | other | downstream | 512156 | 31008756 ~ 31014201 (-) |
| LOC110495992 | LOC106588166 | other | downstream | 573024 | 30911827 ~ 30955199 (-) |
| G1537091 | NA | other | downstream | 922940 | 30602716 ~ 30603392 (-) |
| G1537022 | NA | other | downstream | 1000959 | 30519892 ~ 30525373 (-) |
| G1538595 | NA | other | upstream | 187973 | 31714506 ~ 31715181 (-) |
| atp5if1a | LOC106588193 | other | upstream | 530778 | 32057280 ~ 32058819 (-) |
| G1539348 | NA | other | upstream | 1035193 | 32561726 ~ 32562120 (-) |
| G1540148 | NA | other | upstream | 1373045 | 32899578 ~ 32936569 (-) |
