Gene
RNA
| Item | Value |
|---|---|
| gene id | G1538487 |
| gene name | LOC106588175 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 31568953 ~ 31571449 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein S100-A1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1760858 | False | 471 | lncRNA | 0.49 | 3 | 31568953 | 31571449 |
| TU1760859 | True | 253 | lncRNA | 0.50 | 3 | 31568953 | 31571449 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496005 | s10a4 | coding | downstream | 33577 | 31530404 ~ 31535376 (-) |
| LOC110496004 | LOC106588173 | coding | downstream | 44070 | 31492852 ~ 31524883 (-) |
| LOC110496926 | NA | coding | downstream | 109866 | 31458837 ~ 31459087 (-) |
| LOC110495998 | LOC106588170 | coding | downstream | 472670 | 31090655 ~ 31096283 (-) |
| LOC110495999 | NA | coding | downstream | 483510 | 31077176 ~ 31085443 (-) |
| LOC110496009 | LOC106588178 | coding | upstream | 57414 | 31628863 ~ 31654236 (-) |
| LOC100136047 | LOC106605923 | coding | upstream | 113391 | 31684840 ~ 31692733 (-) |
| ash1l | LOC106588182 | coding | upstream | 151065 | 31722514 ~ 31769106 (-) |
| LOC110496013 | LOC106588183 | coding | upstream | 200163 | 31771612 ~ 31777330 (-) |
| LOC110496014 | LOC106588184 | coding | upstream | 207815 | 31779264 ~ 31784592 (-) |
| G1538482 | NA | non-coding | downstream | 6545 | 31562112 ~ 31562408 (-) |
| G1538475 | NA | non-coding | downstream | 13987 | 31554745 ~ 31554966 (-) |
| G1538462 | NA | non-coding | downstream | 17730 | 31535733 ~ 31551223 (-) |
| G1538459 | NA | non-coding | downstream | 42420 | 31526332 ~ 31526533 (-) |
| G1538423 | NA | non-coding | downstream | 108368 | 31460386 ~ 31460585 (-) |
| G1538490 | NA | non-coding | upstream | 4866 | 31576315 ~ 31576538 (-) |
| G1538492 | NA | non-coding | upstream | 9892 | 31581341 ~ 31581592 (-) |
| G1538535 | NA | non-coding | upstream | 48699 | 31620148 ~ 31621584 (-) |
| G1538548 | NA | non-coding | upstream | 68108 | 31639557 ~ 31639801 (-) |
| LOC110495994 | LOC106588168 | other | downstream | 554777 | 31008756 ~ 31014201 (-) |
| LOC110495992 | LOC106588166 | other | downstream | 615645 | 30911827 ~ 30955199 (-) |
| G1537091 | NA | other | downstream | 965561 | 30602716 ~ 30603392 (-) |
| G1537022 | NA | other | downstream | 1043580 | 30519892 ~ 30525373 (-) |
| G1538595 | NA | other | upstream | 143057 | 31714506 ~ 31715181 (-) |
| atp5if1a | LOC106588193 | other | upstream | 485862 | 32057280 ~ 32058819 (-) |
| G1539348 | NA | other | upstream | 990277 | 32561726 ~ 32562120 (-) |
| G1540148 | NA | other | upstream | 1328129 | 32899578 ~ 32936569 (-) |
