G1538146


Basic Information

Item Value
gene id G1538146
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 31651641 ~ 31651842 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1760470
CTCCGAacaaacctgtggtttgaattgaaggtGGCAGTCCATAAATGCaaatgaaggatatcaaggatctggaaatattctgtatggaggaatggtctaaaatccctcccaatgtgttctccaatttTCAACTGTAGCTAGTATTGACATTATAATTAAATCCCAATGGATTAGTTTCCATGAAACAGCTGCCGGTGTTGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1760470 True 202 lncRNA 0.40 1 31651641 31651842

Neighbor

gene id symbol gene type direction distance location
LOC110496008 LOC106588176 coding upstream 71322 31578096 ~ 31580320 (+)
LOC110496006 LOC106588175 coding upstream 80192 31568375 ~ 31572239 (+)
LOC110496003 LOC106588172 coding upstream 208067 31430305 ~ 31443574 (+)
LOC110496002 LOC106588171 coding upstream 292829 31254186 ~ 31358812 (+)
LOC110496001 NA coding upstream 491746 31143125 ~ 31159895 (+)
LOC110496011 LOC106588179 coding downstream 6636 31658478 ~ 31696797 (+)
LOC110496017 LOC106588186 coding downstream 155927 31807769 ~ 31812186 (+)
LOC110496018 LOC106588187 coding downstream 162063 31813905 ~ 31858017 (+)
LOC110496019 LOC106588188 coding downstream 230104 31881946 ~ 31919423 (+)
LOC110496020 LOC106588189 coding downstream 272431 31924273 ~ 31952541 (+)
G1538141 NA non-coding upstream 6852 31644567 ~ 31644789 (+)
G1538110 NA non-coding upstream 67631 31583748 ~ 31584010 (+)
G1538106 NA non-coding upstream 76856 31574549 ~ 31574785 (+)
G1538100 NA non-coding upstream 90085 31561209 ~ 31561556 (+)
G1538148 NA non-coding downstream 1571 31653413 ~ 31653816 (+)
G1538184 NA non-coding downstream 61848 31713690 ~ 31714093 (+)
G1538192 NA non-coding downstream 70691 31722533 ~ 31723919 (+)
G1538216 NA non-coding downstream 118394 31770236 ~ 31771343 (+)
G1538219 LOC106588184 non-coding downstream 127430 31779272 ~ 31784559 (+)
G1537251 NA other upstream 823595 30822508 ~ 30828046 (+)
G1536720 NA other upstream 1354295 30297131 ~ 30297346 (+)
G1534495 NA other upstream 2838538 28812829 ~ 28813103 (+)
G1538208 LOC106588182 other downstream 101868 31753710 ~ 31754191 (+)
G1539641 NA other downstream 1368386 33020228 ~ 33020544 (+)
G1539671 LOC106582599 other downstream 1407148 33058990 ~ 33059857 (+)
LOC110496797 LOC106570068 other downstream 1803718 33455560 ~ 33458964 (+)
G1540551 NA other downstream 1837495 33489337 ~ 33491121 (+)

Expression


Co-expression Network