G1538184


Basic Information

Item Value
gene id G1538184
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 31713690 ~ 31714093 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1760513
ccactgttgtgtcgtccgcaaacttgatgattgagttggaggcgtgcgtggccacgcagtcgtgggtgaatagggagtacaggagagggctcagaacgcacccttgtggggccccagtgttgaggatcagcggggaggagatgttgttgcctaccctcaccacctgggggcggcccgtcaggaagtccagtacccagttgcacagggcggggtcgagacccagggtctcgagcttgatgacgagcttggagggtactatggtgttgaatgccgagctgtagtcgatgaacagcattctcacataggtattcctcttgtccagatgggttaggacagtgtgcagtgtggttgagattgcatcgtctgtggacctatttgggcggtaagcaaattggagtgggtct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1760513 True 404 lncRNA 0.56 1 31713690 31714093

Neighbor

gene id symbol gene type direction distance location
LOC110496011 LOC106588179 coding upstream 16893 31658478 ~ 31696797 (+)
LOC110496010 LOC106588177 coding upstream 55571 31586928 ~ 31658119 (+)
LOC110496008 LOC106588176 coding upstream 133371 31578096 ~ 31580320 (+)
LOC110496006 LOC106588175 coding upstream 142241 31568375 ~ 31572239 (+)
LOC110496003 LOC106588172 coding upstream 270116 31430305 ~ 31443574 (+)
LOC110496017 LOC106588186 coding downstream 93676 31807769 ~ 31812186 (+)
LOC110496018 LOC106588187 coding downstream 99812 31813905 ~ 31858017 (+)
LOC110496019 LOC106588188 coding downstream 167853 31881946 ~ 31919423 (+)
LOC110496020 LOC106588189 coding downstream 210180 31924273 ~ 31952541 (+)
LOC110496022 LOC106588190 coding downstream 271662 31985755 ~ 32007951 (+)
G1538148 NA non-coding upstream 59874 31653413 ~ 31653816 (+)
G1538146 NA non-coding upstream 61848 31651641 ~ 31651842 (+)
G1538141 NA non-coding upstream 68901 31644567 ~ 31644789 (+)
G1538110 NA non-coding upstream 129680 31583748 ~ 31584010 (+)
G1538106 NA non-coding upstream 138905 31574549 ~ 31574785 (+)
G1538192 NA non-coding downstream 8440 31722533 ~ 31723919 (+)
G1538216 NA non-coding downstream 56143 31770236 ~ 31771343 (+)
G1538219 LOC106588184 non-coding downstream 65179 31779272 ~ 31784559 (+)
G1538267 NA non-coding downstream 157099 31871192 ~ 31873392 (+)
G1538315 NA non-coding downstream 245749 31959842 ~ 31960078 (+)
G1537251 NA other upstream 885644 30822508 ~ 30828046 (+)
G1536720 NA other upstream 1416344 30297131 ~ 30297346 (+)
G1534495 NA other upstream 2900587 28812829 ~ 28813103 (+)
G1538208 LOC106588182 other downstream 39617 31753710 ~ 31754191 (+)
G1539641 NA other downstream 1306135 33020228 ~ 33020544 (+)
G1539671 LOC106582599 other downstream 1344897 33058990 ~ 33059857 (+)
LOC110496797 LOC106570068 other downstream 1741467 33455560 ~ 33458964 (+)
G1540551 NA other downstream 1775244 33489337 ~ 33491121 (+)

Expression


Co-expression Network