G1538208 (LOC106588182)


Basic Information

Item Value
gene id G1538208
gene name LOC106588182
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 31753710 ~ 31754191 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1760548
tctctctcccagtGCTTCCTCTTCTGGCCTTTCCTGAACTGGCCCTGGACAACCGACTCGATCGCGTCCGTCACAGTGTCCCCCTTCCACGCTCCTCCTCCACGTTCCCGGTGCCTGGTCTGGGTCACTTCGGCCAGAGGGGGCGGCGACGGGGGCGGGGAAGGCAAGGGATGCTTCCTGGGGCGCCCGGGGCCTCTCTTCTTGACCATGTTGTTGCCTGTCCTCGCCTGTCTCTGAAGCTTCTTTGCACGGAGGATCTTGTTGACGTGGTGCAGGCTGTGTTTAGAGGGCTGGGCCCGGTGGGAGTGGTGTGGCGGGGAGGCATCATTGTCCAGGCAGCAGCCCTGGGACGGCGAGTTGTGGCCACAGTGAGAGAGGCAGGCGgaggaggaagagtggaacagaggagggtggtggtggtgctgcctGAGGTGGTCCTCAGGGGTAGAGTGGTCGGCTCGGGTCTGGACACTTGATGTACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1760548 True 482 TUCP 0.64 1 31753710 31754191

Neighbor

gene id symbol gene type direction distance location
LOC110496011 LOC106588179 coding upstream 56913 31658478 ~ 31696797 (+)
LOC110496010 LOC106588177 coding upstream 95591 31586928 ~ 31658119 (+)
LOC110496008 LOC106588176 coding upstream 173391 31578096 ~ 31580320 (+)
LOC110496006 LOC106588175 coding upstream 182261 31568375 ~ 31572239 (+)
LOC110496003 LOC106588172 coding upstream 310136 31430305 ~ 31443574 (+)
LOC110496017 LOC106588186 coding downstream 53578 31807769 ~ 31812186 (+)
LOC110496018 LOC106588187 coding downstream 59714 31813905 ~ 31858017 (+)
LOC110496019 LOC106588188 coding downstream 127755 31881946 ~ 31919423 (+)
LOC110496020 LOC106588189 coding downstream 170082 31924273 ~ 31952541 (+)
LOC110496022 LOC106588190 coding downstream 231564 31985755 ~ 32007951 (+)
G1538192 NA non-coding upstream 29791 31722533 ~ 31723919 (+)
G1538184 NA non-coding upstream 39617 31713690 ~ 31714093 (+)
G1538148 NA non-coding upstream 99894 31653413 ~ 31653816 (+)
G1538146 NA non-coding upstream 101868 31651641 ~ 31651842 (+)
G1538141 NA non-coding upstream 108921 31644567 ~ 31644789 (+)
G1538216 NA non-coding downstream 16045 31770236 ~ 31771343 (+)
G1538219 LOC106588184 non-coding downstream 25081 31779272 ~ 31784559 (+)
G1538267 NA non-coding downstream 117001 31871192 ~ 31873392 (+)
G1538315 NA non-coding downstream 205651 31959842 ~ 31960078 (+)
G1538316 NA non-coding downstream 205914 31960105 ~ 31960329 (+)
G1537251 NA other upstream 925664 30822508 ~ 30828046 (+)
G1536720 NA other upstream 1456364 30297131 ~ 30297346 (+)
G1534495 NA other upstream 2940607 28812829 ~ 28813103 (+)
G1539641 NA other downstream 1266037 33020228 ~ 33020544 (+)
G1539671 LOC106582599 other downstream 1304799 33058990 ~ 33059857 (+)
LOC110496797 LOC106570068 other downstream 1701369 33455560 ~ 33458964 (+)
G1540551 NA other downstream 1735146 33489337 ~ 33491121 (+)
LOC110496043 LOC106588212 other downstream 1781085 33535229 ~ 33537569 (+)

Expression


Co-expression Network