Gene
RNA
| Item | Value |
|---|---|
| gene id | G1538318 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 31961163 ~ 31962400 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: exocyst complex component 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1760668 | True | 1238 | lncRNA | 0.45 | 1 | 31961163 | 31962400 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496020 | LOC106588189 | coding | upstream | 8622 | 31924273 ~ 31952541 (+) |
| LOC110496019 | LOC106588188 | coding | upstream | 41740 | 31881946 ~ 31919423 (+) |
| LOC110496018 | LOC106588187 | coding | upstream | 103146 | 31813905 ~ 31858017 (+) |
| LOC110496017 | LOC106588186 | coding | upstream | 148977 | 31807769 ~ 31812186 (+) |
| LOC110496011 | LOC106588179 | coding | upstream | 264366 | 31658478 ~ 31696797 (+) |
| LOC110496022 | LOC106588190 | coding | downstream | 23355 | 31985755 ~ 32007951 (+) |
| LOC110496023 | LOC106588191 | coding | downstream | 45829 | 32008229 ~ 32020839 (+) |
| LOC118941132 | NA | coding | downstream | 95652 | 32058052 ~ 32064812 (+) |
| LOC110496027 | LOC106588195 | coding | downstream | 379309 | 32341709 ~ 32351799 (+) |
| LOC110496028 | NA | coding | downstream | 389655 | 32352055 ~ 32361876 (+) |
| G1538316 | NA | non-coding | upstream | 834 | 31960105 ~ 31960329 (+) |
| G1538315 | NA | non-coding | upstream | 1085 | 31959842 ~ 31960078 (+) |
| G1538267 | NA | non-coding | upstream | 87771 | 31871192 ~ 31873392 (+) |
| G1538219 | LOC106588184 | non-coding | upstream | 176604 | 31779272 ~ 31784559 (+) |
| G1538216 | NA | non-coding | upstream | 189820 | 31770236 ~ 31771343 (+) |
| G1538317 | NA | non-coding | downstream | 1432 | 31963832 ~ 31966021 (+) |
| G1538323 | NA | non-coding | downstream | 8102 | 31970502 ~ 31970756 (+) |
| G1538330 | NA | non-coding | downstream | 16830 | 31979230 ~ 31979463 (+) |
| G1538326 | NA | non-coding | downstream | 20209 | 31982609 ~ 31983034 (+) |
| G1538342 | NA | non-coding | downstream | 28622 | 31991022 ~ 31992068 (+) |
| G1538208 | LOC106588182 | other | upstream | 206972 | 31753710 ~ 31754191 (+) |
| LOC110496008 | LOC106588176 | other | upstream | 380843 | 31578096 ~ 31580320 (+) |
| LOC110496006 | LOC106588175 | other | upstream | 388924 | 31568375 ~ 31572239 (+) |
| G1537251 | NA | other | upstream | 1133117 | 30822508 ~ 30828046 (+) |
| G1536720 | NA | other | upstream | 1663817 | 30297131 ~ 30297346 (+) |
| G1539641 | NA | other | downstream | 1057828 | 33020228 ~ 33020544 (+) |
| G1539671 | LOC106582599 | other | downstream | 1096590 | 33058990 ~ 33059857 (+) |
| LOC110496797 | LOC106570068 | other | downstream | 1493160 | 33455560 ~ 33458964 (+) |
| G1540551 | NA | other | downstream | 1526937 | 33489337 ~ 33491121 (+) |
| LOC110496043 | LOC106588212 | other | downstream | 1572876 | 33535229 ~ 33537569 (+) |
