G1538342


Basic Information

Item Value
gene id G1538342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 31991022 ~ 31992068 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1760698
tctgaggagcctccactgtagCATATACATGTGAGACTGTTGTCTGCAGCAGTGCTATTGGACTCGTGGCTGTGGATTTGTTGTGCActgagaacggcgctcagaacccaaaacagccattTTGGactcaacaaagttagaaacaacaccataaatattcacttccctttgatgatcttcatcagaaggcactcccaggagtCCCAGGTCGACAATAAATGAccgatttgttccataaagtccgtcatttatgtccaaatagccacttgttgttagcgtgttcagcccagtaagcCATCTTCATGAGACAAAAACTCAAAGTTCCgttacatcatttgacatgtttctaaaggactgtatggaatcaatctttaggatgtttttaacataaaacatcaataatgttccaaccggagaattcctttgtcttcagaaaagcactggaacgagaggtaactctgtcgggagcgcgcgtcatgagaccaaggcactctgccagaccactggcTCAGAGGTCTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1760698 True 519 lncRNA 0.44 2 31991022 31992068

Neighbor

gene id symbol gene type direction distance location
LOC110496020 LOC106588189 coding upstream 38481 31924273 ~ 31952541 (+)
LOC110496019 LOC106588188 coding upstream 71599 31881946 ~ 31919423 (+)
LOC110496018 LOC106588187 coding upstream 133005 31813905 ~ 31858017 (+)
LOC110496017 LOC106588186 coding upstream 178836 31807769 ~ 31812186 (+)
LOC110496011 LOC106588179 coding upstream 294225 31658478 ~ 31696797 (+)
LOC110496023 LOC106588191 coding downstream 16161 32008229 ~ 32020839 (+)
LOC118941132 NA coding downstream 65984 32058052 ~ 32064812 (+)
LOC110496027 LOC106588195 coding downstream 349641 32341709 ~ 32351799 (+)
LOC110496028 NA coding downstream 359987 32352055 ~ 32361876 (+)
LOC118941135 NA coding downstream 581888 32573956 ~ 32659643 (+)
G1538326 NA non-coding upstream 7988 31982609 ~ 31983034 (+)
G1538330 NA non-coding upstream 11559 31979230 ~ 31979463 (+)
G1538323 NA non-coding upstream 20266 31970502 ~ 31970756 (+)
G1538317 NA non-coding upstream 25001 31963832 ~ 31966021 (+)
G1538318 NA non-coding upstream 28622 31961163 ~ 31962400 (+)
G1538336 NA non-coding downstream 33716 32025784 ~ 32079330 (+)
G1538382 NA non-coding downstream 88181 32080249 ~ 32080726 (+)
G1538974 NA non-coding downstream 258119 32250187 ~ 32250417 (+)
G1539280 NA non-coding downstream 513941 32506009 ~ 32506227 (+)
G1539310 NA non-coding downstream 539022 32531090 ~ 32531297 (+)
G1538208 LOC106588182 other upstream 236831 31753710 ~ 31754191 (+)
LOC110496008 LOC106588176 other upstream 410702 31578096 ~ 31580320 (+)
LOC110496006 LOC106588175 other upstream 418783 31568375 ~ 31572239 (+)
G1537251 NA other upstream 1162976 30822508 ~ 30828046 (+)
G1536720 NA other upstream 1693676 30297131 ~ 30297346 (+)
G1539641 NA other downstream 1028160 33020228 ~ 33020544 (+)
G1539671 LOC106582599 other downstream 1066922 33058990 ~ 33059857 (+)
LOC110496797 LOC106570068 other downstream 1463492 33455560 ~ 33458964 (+)
G1540551 NA other downstream 1497269 33489337 ~ 33491121 (+)
LOC110496043 LOC106588212 other downstream 1543208 33535229 ~ 33537569 (+)

Expression


Co-expression Network