Gene
RNA
| Item | Value |
|---|---|
| gene id | G1539307 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 32528995 ~ 32529199 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tubulin tyrosine ligase-like family member 6a |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1761726 | True | 205 | lncRNA | 0.50 | 1 | 32528995 | 32529199 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| eomesa | eomesa | coding | downstream | 74612 | 32450001 ~ 32454383 (-) |
| LOC110496030 | LOC106588196 | coding | downstream | 111172 | 32365592 ~ 32417823 (-) |
| LOC118941133 | NA | coding | downstream | 181314 | 32336621 ~ 32347681 (-) |
| LOC118941048 | NA | coding | downstream | 355569 | 32172548 ~ 32173426 (-) |
| LOC110496026 | LOC106588194 | coding | downstream | 414193 | 32087227 ~ 32114802 (-) |
| LOC110496796 | osbpl10 | coding | upstream | 643227 | 33172426 ~ 33309331 (-) |
| LOC110496036 | LOC106588206 | coding | upstream | 837488 | 33366687 ~ 33379508 (-) |
| cdcp1b | cdcp1 | coding | upstream | 863214 | 33392413 ~ 33414958 (-) |
| LOC110496042 | ddah2 | coding | upstream | 996942 | 33526141 ~ 33533687 (-) |
| LOC110496044 | LOC106588213 | coding | upstream | 1031643 | 33560842 ~ 33573866 (-) |
| G1539295 | NA | non-coding | downstream | 4313 | 32518678 ~ 32524682 (-) |
| G1539288 | NA | non-coding | downstream | 10844 | 32517950 ~ 32518151 (-) |
| G1539281 | NA | non-coding | downstream | 22479 | 32506296 ~ 32506516 (-) |
| G1539277 | NA | non-coding | downstream | 26660 | 32502077 ~ 32502335 (-) |
| G1539256 | NA | non-coding | downstream | 52758 | 32475993 ~ 32476237 (-) |
| G1539318 | NA | non-coding | upstream | 7380 | 32536579 ~ 32536860 (-) |
| G1539346 | NA | non-coding | upstream | 31898 | 32561097 ~ 32561442 (-) |
| G1540167 | NA | non-coding | upstream | 395241 | 32924440 ~ 32925593 (-) |
| G1540190 | NA | non-coding | upstream | 430118 | 32959317 ~ 32964976 (-) |
| G1540193 | NA | non-coding | upstream | 436502 | 32965701 ~ 32966382 (-) |
| atp5if1a | LOC106588193 | other | downstream | 470210 | 32057280 ~ 32058819 (-) |
| G1538595 | NA | other | downstream | 813814 | 31714506 ~ 31715181 (-) |
| LOC100136047 | LOC106605923 | other | downstream | 836324 | 31684840 ~ 31692733 (-) |
| LOC110496004 | LOC106588173 | other | downstream | 1005539 | 31492852 ~ 31524883 (-) |
| LOC110495994 | LOC106588168 | other | downstream | 1514819 | 31008756 ~ 31014201 (-) |
| G1539348 | NA | other | upstream | 32527 | 32561726 ~ 32562120 (-) |
| G1540148 | NA | other | upstream | 370379 | 32899578 ~ 32936569 (-) |
| G1540473 | LOC106581475 | other | upstream | 862140 | 33391339 ~ 33391752 (-) |
| LOC110496048 | LOC106588215 | other | upstream | 1073275 | 33602474 ~ 33610948 (-) |
| LOC110496049 | LOC106588217 | other | upstream | 1128442 | 33657641 ~ 33674304 (-) |
