G1539325


Basic Information

Item Value
gene id G1539325
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 32544311 ~ 32544531 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1761744
gtcttaaagtaatgatggactttcgtttctgtttgcttatttgagctgttcttgccataatatggacttggtcttttaccaaaaagggctatcttctgtatatcacccctaccttgtcacaacacaactgattaactcaaacgcattaagaaggaaagaaatgaacaaggcacacctgttaattgaaatgcattccaggtgactacctcatgaagctggtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1761744 True 221 lncRNA 0.38 1 32544311 32544531

Neighbor

gene id symbol gene type direction distance location
LOC110496028 NA coding upstream 182435 32352055 ~ 32361876 (+)
LOC110496027 LOC106588195 coding upstream 192512 32341709 ~ 32351799 (+)
LOC118941132 NA coding upstream 479499 32058052 ~ 32064812 (+)
LOC110496023 LOC106588191 coding upstream 523472 32008229 ~ 32020839 (+)
LOC110496022 LOC106588190 coding upstream 536360 31985755 ~ 32007951 (+)
LOC118941135 NA coding downstream 29425 32573956 ~ 32659643 (+)
LOC110496032 LOC106588200 coding downstream 175818 32720349 ~ 32964969 (+)
LOC110496033 LOC106588201 coding downstream 450003 32994534 ~ 33050381 (+)
LOC110496034 LOC106588202 coding downstream 542070 33086601 ~ 33172114 (+)
LOC110496035 tmem42 coding downstream 808264 33352795 ~ 33356691 (+)
G1539311 NA non-coding upstream 11237 32532821 ~ 32533074 (+)
G1539310 NA non-coding upstream 13014 32531090 ~ 32531297 (+)
G1539280 NA non-coding upstream 38084 32506009 ~ 32506227 (+)
G1538974 NA non-coding upstream 293894 32250187 ~ 32250417 (+)
G1538382 NA non-coding upstream 463585 32080249 ~ 32080726 (+)
G1539329 NA non-coding downstream 3417 32547948 ~ 32548190 (+)
G1539347 NA non-coding downstream 16985 32561516 ~ 32561810 (+)
G1539438 NA non-coding downstream 149796 32694327 ~ 32694635 (+)
G1539583 NA non-coding downstream 364551 32909082 ~ 32909627 (+)
G1538208 LOC106588182 other upstream 790120 31753710 ~ 31754191 (+)
LOC110496008 LOC106588176 other upstream 963991 31578096 ~ 31580320 (+)
LOC110496006 LOC106588175 other upstream 972072 31568375 ~ 31572239 (+)
G1537251 NA other upstream 1716265 30822508 ~ 30828046 (+)
G1536720 NA other upstream 2246965 30297131 ~ 30297346 (+)
G1539641 NA other downstream 475697 33020228 ~ 33020544 (+)
G1539671 LOC106582599 other downstream 514459 33058990 ~ 33059857 (+)
LOC110496797 LOC106570068 other downstream 911029 33455560 ~ 33458964 (+)
G1540551 NA other downstream 944806 33489337 ~ 33491121 (+)
LOC110496043 LOC106588212 other downstream 990745 33535229 ~ 33537569 (+)

Expression


Co-expression Network