Gene
RNA
| Item | Value |
|---|---|
| gene id | G1539329 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 32547948 ~ 32548190 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1761748 | True | 243 | lncRNA | 0.54 | 1 | 32547948 | 32548190 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496028 | NA | coding | upstream | 186072 | 32352055 ~ 32361876 (+) |
| LOC110496027 | LOC106588195 | coding | upstream | 196149 | 32341709 ~ 32351799 (+) |
| LOC118941132 | NA | coding | upstream | 483136 | 32058052 ~ 32064812 (+) |
| LOC110496023 | LOC106588191 | coding | upstream | 527109 | 32008229 ~ 32020839 (+) |
| LOC110496022 | LOC106588190 | coding | upstream | 539997 | 31985755 ~ 32007951 (+) |
| LOC118941135 | NA | coding | downstream | 25766 | 32573956 ~ 32659643 (+) |
| LOC110496032 | LOC106588200 | coding | downstream | 172159 | 32720349 ~ 32964969 (+) |
| LOC110496033 | LOC106588201 | coding | downstream | 446344 | 32994534 ~ 33050381 (+) |
| LOC110496034 | LOC106588202 | coding | downstream | 538411 | 33086601 ~ 33172114 (+) |
| LOC110496035 | tmem42 | coding | downstream | 804605 | 33352795 ~ 33356691 (+) |
| G1539325 | NA | non-coding | upstream | 3417 | 32544311 ~ 32544531 (+) |
| G1539311 | NA | non-coding | upstream | 14874 | 32532821 ~ 32533074 (+) |
| G1539310 | NA | non-coding | upstream | 16651 | 32531090 ~ 32531297 (+) |
| G1539280 | NA | non-coding | upstream | 41721 | 32506009 ~ 32506227 (+) |
| G1538974 | NA | non-coding | upstream | 297531 | 32250187 ~ 32250417 (+) |
| G1539347 | NA | non-coding | downstream | 13326 | 32561516 ~ 32561810 (+) |
| G1539438 | NA | non-coding | downstream | 146137 | 32694327 ~ 32694635 (+) |
| G1539583 | NA | non-coding | downstream | 360892 | 32909082 ~ 32909627 (+) |
| G1538208 | LOC106588182 | other | upstream | 793757 | 31753710 ~ 31754191 (+) |
| LOC110496008 | LOC106588176 | other | upstream | 967628 | 31578096 ~ 31580320 (+) |
| LOC110496006 | LOC106588175 | other | upstream | 975709 | 31568375 ~ 31572239 (+) |
| G1537251 | NA | other | upstream | 1719902 | 30822508 ~ 30828046 (+) |
| G1536720 | NA | other | upstream | 2250602 | 30297131 ~ 30297346 (+) |
| G1539641 | NA | other | downstream | 472038 | 33020228 ~ 33020544 (+) |
| G1539671 | LOC106582599 | other | downstream | 510800 | 33058990 ~ 33059857 (+) |
| LOC110496797 | LOC106570068 | other | downstream | 907370 | 33455560 ~ 33458964 (+) |
| G1540551 | NA | other | downstream | 941147 | 33489337 ~ 33491121 (+) |
| LOC110496043 | LOC106588212 | other | downstream | 987086 | 33535229 ~ 33537569 (+) |
