G1539438


Basic Information

Item Value
gene id G1539438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 32694327 ~ 32694635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1761863
GACTAATGTAAGCTAGCTAAGAGTAACTCAATCTGGTAGCCATcactctgtcgcagccgggcgacgcacaattggcctagcgtcatccgggttagggaaggtttggccggtagggatatccttgtctcatcgtgcaccagcgactcctgtggcgggccgggggcagtgcatgctaaccaaggttgccaggtgcagggtgtttcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtgtggcttggttgggttgtgtattgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1761863 True 287 lncRNA 0.57 2 32694327 32694635

Neighbor

gene id symbol gene type direction distance location
LOC118941135 NA coding upstream 34768 32573956 ~ 32659643 (+)
LOC110496028 NA coding upstream 332451 32352055 ~ 32361876 (+)
LOC110496027 LOC106588195 coding upstream 342528 32341709 ~ 32351799 (+)
LOC118941132 NA coding upstream 629515 32058052 ~ 32064812 (+)
LOC110496023 LOC106588191 coding upstream 673488 32008229 ~ 32020839 (+)
LOC110496032 LOC106588200 coding downstream 25714 32720349 ~ 32964969 (+)
LOC110496033 LOC106588201 coding downstream 299899 32994534 ~ 33050381 (+)
LOC110496034 LOC106588202 coding downstream 391966 33086601 ~ 33172114 (+)
LOC110496035 tmem42 coding downstream 658160 33352795 ~ 33356691 (+)
exosc7 exosc7 coding downstream 685955 33380590 ~ 33389754 (+)
G1539347 NA non-coding upstream 132517 32561516 ~ 32561810 (+)
G1539329 NA non-coding upstream 146137 32547948 ~ 32548190 (+)
G1539325 NA non-coding upstream 149796 32544311 ~ 32544531 (+)
G1539311 NA non-coding upstream 161253 32532821 ~ 32533074 (+)
G1539583 NA non-coding downstream 214447 32909082 ~ 32909627 (+)
G1539622 NA non-coding downstream 275825 32970460 ~ 32970810 (+)
G1539634 NA non-coding downstream 312142 33006777 ~ 33006977 (+)
G1539640 NA non-coding downstream 324291 33018926 ~ 33019149 (+)
G1538208 LOC106588182 other upstream 940136 31753710 ~ 31754191 (+)
LOC110496008 LOC106588176 other upstream 1114007 31578096 ~ 31580320 (+)
LOC110496006 LOC106588175 other upstream 1122088 31568375 ~ 31572239 (+)
G1537251 NA other upstream 1866281 30822508 ~ 30828046 (+)
G1536720 NA other upstream 2396981 30297131 ~ 30297346 (+)
G1539641 NA other downstream 325593 33020228 ~ 33020544 (+)
G1539671 LOC106582599 other downstream 364355 33058990 ~ 33059857 (+)
LOC110496797 LOC106570068 other downstream 760925 33455560 ~ 33458964 (+)
G1540551 NA other downstream 794702 33489337 ~ 33491121 (+)
LOC110496043 LOC106588212 other downstream 840641 33535229 ~ 33537569 (+)

Expression


Co-expression Network