Gene
RNA
| Item | Value |
|---|---|
| gene id | G1540197 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 32990865 ~ 32992424 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1762654 | False | 500 | lncRNA | 0.44 | 2 | 32990865 | 32992424 |
| TU1762655 | True | 500 | lncRNA | 0.44 | 2 | 32990865 | 32992424 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| eomesa | eomesa | coding | downstream | 536482 | 32450001 ~ 32454383 (-) |
| LOC110496030 | LOC106588196 | coding | downstream | 573042 | 32365592 ~ 32417823 (-) |
| LOC118941133 | NA | coding | downstream | 643184 | 32336621 ~ 32347681 (-) |
| LOC118941048 | NA | coding | downstream | 817439 | 32172548 ~ 32173426 (-) |
| LOC110496026 | LOC106588194 | coding | downstream | 876063 | 32087227 ~ 32114802 (-) |
| LOC110496796 | osbpl10 | coding | upstream | 180002 | 33172426 ~ 33309331 (-) |
| LOC110496036 | LOC106588206 | coding | upstream | 374263 | 33366687 ~ 33379508 (-) |
| cdcp1b | cdcp1 | coding | upstream | 399989 | 33392413 ~ 33414958 (-) |
| LOC110496042 | ddah2 | coding | upstream | 533717 | 33526141 ~ 33533687 (-) |
| LOC110496044 | LOC106588213 | coding | upstream | 568418 | 33560842 ~ 33573866 (-) |
| G1540195 | NA | non-coding | downstream | 21487 | 32969117 ~ 32969378 (-) |
| G1540194 | NA | non-coding | downstream | 23415 | 32967250 ~ 32967450 (-) |
| G1540193 | NA | non-coding | downstream | 24483 | 32965701 ~ 32966382 (-) |
| G1540190 | NA | non-coding | downstream | 25889 | 32959317 ~ 32964976 (-) |
| G1540167 | NA | non-coding | downstream | 65272 | 32924440 ~ 32925593 (-) |
| G1540210 | NA | non-coding | upstream | 18842 | 33011266 ~ 33011472 (-) |
| G1540213 | NA | non-coding | upstream | 21800 | 33014224 ~ 33014471 (-) |
| G1540237 | NA | non-coding | upstream | 66127 | 33058551 ~ 33058976 (-) |
| G1540238 | LOC106604990 | non-coding | upstream | 66820 | 33059244 ~ 33059629 (-) |
| G1540239 | NA | non-coding | upstream | 70992 | 33063416 ~ 33063646 (-) |
| G1540148 | NA | other | downstream | 54296 | 32899578 ~ 32936569 (-) |
| G1539348 | NA | other | downstream | 428745 | 32561726 ~ 32562120 (-) |
| atp5if1a | LOC106588193 | other | downstream | 932080 | 32057280 ~ 32058819 (-) |
| G1538595 | NA | other | downstream | 1275684 | 31714506 ~ 31715181 (-) |
| LOC100136047 | LOC106605923 | other | downstream | 1298194 | 31684840 ~ 31692733 (-) |
| G1540473 | LOC106581475 | other | upstream | 398915 | 33391339 ~ 33391752 (-) |
| LOC110496048 | LOC106588215 | other | upstream | 610050 | 33602474 ~ 33610948 (-) |
| LOC110496049 | LOC106588217 | other | upstream | 665217 | 33657641 ~ 33674304 (-) |
| G1541318 | NA | other | upstream | 1169503 | 34161927 ~ 34162458 (-) |
| atp9b | atp9b | other | upstream | 1742950 | 34735374 ~ 34794929 (-) |
