Gene
RNA
| Item | Value |
|---|---|
| gene id | G1539640 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33018926 ~ 33019149 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1762071 | True | 224 | lncRNA | 0.50 | 1 | 33018926 | 33019149 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496032 | LOC106588200 | coding | upstream | 59868 | 32720349 ~ 32964969 (+) |
| LOC118941135 | NA | coding | upstream | 359367 | 32573956 ~ 32659643 (+) |
| LOC110496028 | NA | coding | upstream | 657050 | 32352055 ~ 32361876 (+) |
| LOC110496027 | LOC106588195 | coding | upstream | 667127 | 32341709 ~ 32351799 (+) |
| LOC118941132 | NA | coding | upstream | 954114 | 32058052 ~ 32064812 (+) |
| LOC110496034 | LOC106588202 | coding | downstream | 67452 | 33086601 ~ 33172114 (+) |
| LOC110496035 | tmem42 | coding | downstream | 333646 | 33352795 ~ 33356691 (+) |
| exosc7 | exosc7 | coding | downstream | 361441 | 33380590 ~ 33389754 (+) |
| nrm | nrm | coding | downstream | 401685 | 33420834 ~ 33426552 (+) |
| LOC110496040 | LOC106588209 | coding | downstream | 414217 | 33433366 ~ 33450101 (+) |
| G1539634 | NA | non-coding | upstream | 11949 | 33006777 ~ 33006977 (+) |
| G1539622 | NA | non-coding | upstream | 48116 | 32970460 ~ 32970810 (+) |
| G1539583 | NA | non-coding | upstream | 109299 | 32909082 ~ 32909627 (+) |
| G1539438 | NA | non-coding | upstream | 324291 | 32694327 ~ 32694635 (+) |
| G1539642 | NA | non-coding | downstream | 1526 | 33020675 ~ 33020951 (+) |
| G1539643 | NA | non-coding | downstream | 2091 | 33021240 ~ 33021461 (+) |
| G1539651 | NA | non-coding | downstream | 9236 | 33028385 ~ 33028676 (+) |
| G1539625 | NA | non-coding | downstream | 31285 | 33050434 ~ 33051933 (+) |
| G1539669 | NA | non-coding | downstream | 35277 | 33054426 ~ 33054847 (+) |
| G1538208 | LOC106588182 | other | upstream | 1264735 | 31753710 ~ 31754191 (+) |
| LOC110496008 | LOC106588176 | other | upstream | 1438606 | 31578096 ~ 31580320 (+) |
| LOC110496006 | LOC106588175 | other | upstream | 1446687 | 31568375 ~ 31572239 (+) |
| G1537251 | NA | other | upstream | 2190880 | 30822508 ~ 30828046 (+) |
| G1536720 | NA | other | upstream | 2721580 | 30297131 ~ 30297346 (+) |
| G1539641 | NA | other | downstream | 1079 | 33020228 ~ 33020544 (+) |
| G1539671 | LOC106582599 | other | downstream | 39841 | 33058990 ~ 33059857 (+) |
| LOC110496797 | LOC106570068 | other | downstream | 436411 | 33455560 ~ 33458964 (+) |
| G1540551 | NA | other | downstream | 470188 | 33489337 ~ 33491121 (+) |
| LOC110496043 | LOC106588212 | other | downstream | 516127 | 33535229 ~ 33537569 (+) |
