Gene
RNA
| Item | Value |
|---|---|
| gene id | G1539677 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33069927 ~ 33070147 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1762109 | True | 221 | lncRNA | 0.43 | 1 | 33069927 | 33070147 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496033 | LOC106588201 | coding | upstream | 19546 | 32994534 ~ 33050381 (+) |
| LOC110496032 | LOC106588200 | coding | upstream | 110869 | 32720349 ~ 32964969 (+) |
| LOC118941135 | NA | coding | upstream | 410368 | 32573956 ~ 32659643 (+) |
| LOC110496028 | NA | coding | upstream | 708051 | 32352055 ~ 32361876 (+) |
| LOC110496027 | LOC106588195 | coding | upstream | 718128 | 32341709 ~ 32351799 (+) |
| LOC110496034 | LOC106588202 | coding | downstream | 16454 | 33086601 ~ 33172114 (+) |
| LOC110496035 | tmem42 | coding | downstream | 282648 | 33352795 ~ 33356691 (+) |
| exosc7 | exosc7 | coding | downstream | 310443 | 33380590 ~ 33389754 (+) |
| nrm | nrm | coding | downstream | 350687 | 33420834 ~ 33426552 (+) |
| LOC110496040 | LOC106588209 | coding | downstream | 363219 | 33433366 ~ 33450101 (+) |
| G1539674 | NA | non-coding | upstream | 2916 | 33066781 ~ 33067011 (+) |
| G1539669 | NA | non-coding | upstream | 15080 | 33054426 ~ 33054847 (+) |
| G1539625 | NA | non-coding | upstream | 17994 | 33050434 ~ 33051933 (+) |
| G1539651 | NA | non-coding | upstream | 41251 | 33028385 ~ 33028676 (+) |
| G1539643 | NA | non-coding | upstream | 48466 | 33021240 ~ 33021461 (+) |
| G1539824 | NA | non-coding | downstream | 222564 | 33292711 ~ 33386401 (+) |
| G1539886 | NA | non-coding | downstream | 320851 | 33390998 ~ 33391220 (+) |
| G1539887 | NA | non-coding | downstream | 321438 | 33391585 ~ 33391843 (+) |
| G1539890 | cdcp1 | non-coding | downstream | 324807 | 33394954 ~ 33398266 (+) |
| G1539671 | LOC106582599 | other | upstream | 10070 | 33058990 ~ 33059857 (+) |
| G1539641 | NA | other | upstream | 49383 | 33020228 ~ 33020544 (+) |
| G1538208 | LOC106588182 | other | upstream | 1315736 | 31753710 ~ 31754191 (+) |
| LOC110496008 | LOC106588176 | other | upstream | 1489607 | 31578096 ~ 31580320 (+) |
| LOC110496006 | LOC106588175 | other | upstream | 1497688 | 31568375 ~ 31572239 (+) |
| LOC110496797 | LOC106570068 | other | downstream | 385413 | 33455560 ~ 33458964 (+) |
| G1540551 | NA | other | downstream | 419190 | 33489337 ~ 33491121 (+) |
| LOC110496043 | LOC106588212 | other | downstream | 465129 | 33535229 ~ 33537569 (+) |
| G1540996 | NA | other | downstream | 1008571 | 34078718 ~ 34079074 (+) |
| LOC110496058 | LOC106588349 | other | downstream | 1058194 | 34127192 ~ 34133734 (+) |
