Gene
RNA
| Item | Value |
|---|---|
| gene id | G1539890 |
| gene name | cdcp1 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33394954 ~ 33398266 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| cdcp1 | Predicted to be located in extracellular region and plasma membrane. Predicted to be integral component of membrane. |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1762338 | True | 598 | lncRNA | 0.54 | 2 | 33394954 | 33398266 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| exosc7 | exosc7 | coding | upstream | 5200 | 33380590 ~ 33389754 (+) |
| LOC110496035 | tmem42 | coding | upstream | 38263 | 33352795 ~ 33356691 (+) |
| LOC110496034 | LOC106588202 | coding | upstream | 222840 | 33086601 ~ 33172114 (+) |
| LOC110496033 | LOC106588201 | coding | upstream | 344573 | 32994534 ~ 33050381 (+) |
| LOC110496032 | LOC106588200 | coding | upstream | 435896 | 32720349 ~ 32964969 (+) |
| nrm | nrm | coding | downstream | 22568 | 33420834 ~ 33426552 (+) |
| LOC110496040 | LOC106588209 | coding | downstream | 35100 | 33433366 ~ 33450101 (+) |
| LOC110496797 | LOC106570068 | coding | downstream | 58656 | 33455560 ~ 33458964 (+) |
| LOC110496041 | LOC106588210 | coding | downstream | 81830 | 33480096 ~ 33489024 (+) |
| LOC100136630 | LOC106570065 | coding | downstream | 110570 | 33508836 ~ 33512426 (+) |
| G1539887 | NA | non-coding | upstream | 3111 | 33391585 ~ 33391843 (+) |
| G1539886 | NA | non-coding | upstream | 3734 | 33390998 ~ 33391220 (+) |
| G1539824 | NA | non-coding | upstream | 8553 | 33292711 ~ 33386401 (+) |
| G1539677 | NA | non-coding | upstream | 324807 | 33069927 ~ 33070147 (+) |
| G1540519 | NA | non-coding | downstream | 62966 | 33461232 ~ 33461432 (+) |
| G1540520 | NA | non-coding | downstream | 63256 | 33461522 ~ 33461832 (+) |
| G1540522 | NA | non-coding | downstream | 64178 | 33462444 ~ 33462735 (+) |
| G1540540 | NA | non-coding | downstream | 76191 | 33474457 ~ 33474722 (+) |
| G1539671 | LOC106582599 | other | upstream | 335097 | 33058990 ~ 33059857 (+) |
| G1539641 | NA | other | upstream | 374410 | 33020228 ~ 33020544 (+) |
| G1538208 | LOC106588182 | other | upstream | 1640763 | 31753710 ~ 31754191 (+) |
| LOC110496008 | LOC106588176 | other | upstream | 1814634 | 31578096 ~ 31580320 (+) |
| LOC110496006 | LOC106588175 | other | upstream | 1822715 | 31568375 ~ 31572239 (+) |
| G1540551 | NA | other | downstream | 91071 | 33489337 ~ 33491121 (+) |
| LOC110496043 | LOC106588212 | other | downstream | 137010 | 33535229 ~ 33537569 (+) |
| G1540996 | NA | other | downstream | 680452 | 34078718 ~ 34079074 (+) |
| LOC110496058 | LOC106588349 | other | downstream | 730075 | 34127192 ~ 34133734 (+) |
