Gene
RNA
| Item | Value |
|---|---|
| gene id | G1540499 |
| gene name | LOC106588209 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33433804 ~ 33434235 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110496040 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1762985 | True | 432 | lncRNA | 0.52 | 1 | 33433804 | 33434235 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cdcp1b | cdcp1 | coding | downstream | 18846 | 33392413 ~ 33414958 (-) |
| LOC110496036 | LOC106588206 | coding | downstream | 54296 | 33366687 ~ 33379508 (-) |
| LOC110496796 | osbpl10 | coding | downstream | 124473 | 33172426 ~ 33309331 (-) |
| eomesa | eomesa | coding | downstream | 979421 | 32450001 ~ 32454383 (-) |
| LOC110496030 | LOC106588196 | coding | downstream | 1015981 | 32365592 ~ 32417823 (-) |
| LOC110496042 | ddah2 | coding | upstream | 91906 | 33526141 ~ 33533687 (-) |
| LOC110496044 | LOC106588213 | coding | upstream | 126607 | 33560842 ~ 33573866 (-) |
| LOC110496045 | lynx1 | coding | upstream | 137779 | 33572014 ~ 33573707 (-) |
| LOC110496046 | lynx1 | coding | upstream | 145561 | 33579796 ~ 33581971 (-) |
| LOC110496048 | LOC106588215 | coding | upstream | 172714 | 33602474 ~ 33610948 (-) |
| G1540475 | NA | non-coding | downstream | 41502 | 33391901 ~ 33392302 (-) |
| G1540472 | NA | non-coding | downstream | 42568 | 33390989 ~ 33391236 (-) |
| G1540466 | exosc7 | non-coding | downstream | 48215 | 33380665 ~ 33385589 (-) |
| G1540456 | tmem42 | non-coding | downstream | 77142 | 33352824 ~ 33356662 (-) |
| G1540320 | NA | non-coding | downstream | 261711 | 33170529 ~ 33172093 (-) |
| G1540500 | LOC106588209 | non-coding | upstream | 555 | 33434790 ~ 33435085 (-) |
| G1540501 | LOC106588209 | non-coding | upstream | 1072 | 33435307 ~ 33435725 (-) |
| G1540521 | NA | non-coding | upstream | 27870 | 33462105 ~ 33462320 (-) |
| G1540531 | NA | non-coding | upstream | 34399 | 33468634 ~ 33468949 (-) |
| G1540532 | NA | non-coding | upstream | 35243 | 33469478 ~ 33469716 (-) |
| G1540473 | LOC106581475 | other | downstream | 42052 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 497235 | 32899578 ~ 32936569 (-) |
| G1539348 | NA | other | downstream | 871684 | 32561726 ~ 32562120 (-) |
| atp5if1a | LOC106588193 | other | downstream | 1375019 | 32057280 ~ 32058819 (-) |
| G1538595 | NA | other | downstream | 1718623 | 31714506 ~ 31715181 (-) |
| LOC110496049 | LOC106588217 | other | upstream | 223406 | 33657641 ~ 33674304 (-) |
| G1541318 | NA | other | upstream | 727692 | 34161927 ~ 34162458 (-) |
| atp9b | atp9b | other | upstream | 1301139 | 34735374 ~ 34794929 (-) |
| G1542988 | sast | other | upstream | 1703402 | 35137637 ~ 35138554 (-) |
