Gene
RNA
| Item | Value |
|---|---|
| gene id | G1540540 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33474457 ~ 33474722 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1763030 | True | 266 | lncRNA | 0.36 | 1 | 33474457 | 33474722 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496797 | LOC106570068 | coding | upstream | 15493 | 33455560 ~ 33458964 (+) |
| LOC110496040 | LOC106588209 | coding | upstream | 24356 | 33433366 ~ 33450101 (+) |
| nrm | nrm | coding | upstream | 47905 | 33420834 ~ 33426552 (+) |
| exosc7 | exosc7 | coding | upstream | 84703 | 33380590 ~ 33389754 (+) |
| LOC110496035 | tmem42 | coding | upstream | 117766 | 33352795 ~ 33356691 (+) |
| LOC110496041 | LOC106588210 | coding | downstream | 5374 | 33480096 ~ 33489024 (+) |
| LOC100136630 | LOC106570065 | coding | downstream | 34114 | 33508836 ~ 33512426 (+) |
| LOC118941240 | NA | coding | downstream | 35490 | 33510212 ~ 33510343 (+) |
| LOC118941235 | NA | coding | downstream | 36080 | 33510802 ~ 33510928 (+) |
| LOC118941241 | NA | coding | downstream | 37108 | 33511830 ~ 33511959 (+) |
| G1540522 | NA | non-coding | upstream | 11722 | 33462444 ~ 33462735 (+) |
| G1540520 | NA | non-coding | upstream | 12625 | 33461522 ~ 33461832 (+) |
| G1540519 | NA | non-coding | upstream | 13025 | 33461232 ~ 33461432 (+) |
| G1539890 | cdcp1 | non-coding | upstream | 76191 | 33394954 ~ 33398266 (+) |
| G1540542 | NA | non-coding | downstream | 852 | 33475574 ~ 33475785 (+) |
| G1540543 | NA | non-coding | downstream | 1587 | 33476309 ~ 33476819 (+) |
| G1540545 | NA | non-coding | downstream | 2588 | 33477310 ~ 33477599 (+) |
| G1540561 | NA | non-coding | downstream | 26193 | 33500915 ~ 33501117 (+) |
| G1540562 | NA | non-coding | downstream | 26492 | 33501214 ~ 33501433 (+) |
| G1539671 | LOC106582599 | other | upstream | 414600 | 33058990 ~ 33059857 (+) |
| G1539641 | NA | other | upstream | 453913 | 33020228 ~ 33020544 (+) |
| G1538208 | LOC106588182 | other | upstream | 1720266 | 31753710 ~ 31754191 (+) |
| LOC110496008 | LOC106588176 | other | upstream | 1894137 | 31578096 ~ 31580320 (+) |
| G1540551 | NA | other | downstream | 14615 | 33489337 ~ 33491121 (+) |
| LOC110496043 | LOC106588212 | other | downstream | 60554 | 33535229 ~ 33537569 (+) |
| G1540996 | NA | other | downstream | 603996 | 34078718 ~ 34079074 (+) |
| LOC110496058 | LOC106588349 | other | downstream | 653619 | 34127192 ~ 34133734 (+) |
| mbpa | LOC106588233 | other | downstream | 1408792 | 34883492 ~ 34898413 (+) |
