Gene
RNA
| Item | Value |
|---|---|
| gene id | G1540544 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33476283 ~ 33476819 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1763034 | True | 285 | lncRNA | 0.40 | 2 | 33476283 | 33476819 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cdcp1b | cdcp1 | coding | downstream | 61325 | 33392413 ~ 33414958 (-) |
| LOC110496036 | LOC106588206 | coding | downstream | 96775 | 33366687 ~ 33379508 (-) |
| LOC110496796 | osbpl10 | coding | downstream | 166952 | 33172426 ~ 33309331 (-) |
| eomesa | eomesa | coding | downstream | 1021900 | 32450001 ~ 32454383 (-) |
| LOC110496030 | LOC106588196 | coding | downstream | 1058460 | 32365592 ~ 32417823 (-) |
| LOC110496042 | ddah2 | coding | upstream | 49322 | 33526141 ~ 33533687 (-) |
| LOC110496044 | LOC106588213 | coding | upstream | 84023 | 33560842 ~ 33573866 (-) |
| LOC110496045 | lynx1 | coding | upstream | 95195 | 33572014 ~ 33573707 (-) |
| LOC110496046 | lynx1 | coding | upstream | 102977 | 33579796 ~ 33581971 (-) |
| LOC110496048 | LOC106588215 | coding | upstream | 130130 | 33602474 ~ 33610948 (-) |
| G1540533 | NA | non-coding | downstream | 5872 | 33470138 ~ 33470411 (-) |
| G1540532 | NA | non-coding | downstream | 6567 | 33469478 ~ 33469716 (-) |
| G1540531 | NA | non-coding | downstream | 7334 | 33468634 ~ 33468949 (-) |
| G1540521 | NA | non-coding | downstream | 13963 | 33462105 ~ 33462320 (-) |
| G1540501 | LOC106588209 | non-coding | downstream | 40558 | 33435307 ~ 33435725 (-) |
| G1540546 | NA | non-coding | upstream | 1210 | 33478029 ~ 33478306 (-) |
| G1540636 | NA | non-coding | upstream | 17304 | 33494123 ~ 33494528 (-) |
| G1540637 | NA | non-coding | upstream | 17780 | 33494599 ~ 33494802 (-) |
| G1540640 | NA | non-coding | upstream | 21250 | 33498069 ~ 33498299 (-) |
| G1540648 | NA | non-coding | upstream | 31534 | 33508353 ~ 33508611 (-) |
| G1540473 | LOC106581475 | other | downstream | 84531 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 539714 | 32899578 ~ 32936569 (-) |
| G1539348 | NA | other | downstream | 914163 | 32561726 ~ 32562120 (-) |
| atp5if1a | LOC106588193 | other | downstream | 1417498 | 32057280 ~ 32058819 (-) |
| G1538595 | NA | other | downstream | 1761102 | 31714506 ~ 31715181 (-) |
| LOC110496049 | LOC106588217 | other | upstream | 180822 | 33657641 ~ 33674304 (-) |
| G1541318 | NA | other | upstream | 685108 | 34161927 ~ 34162458 (-) |
| atp9b | atp9b | other | upstream | 1258555 | 34735374 ~ 34794929 (-) |
| G1542988 | sast | other | upstream | 1660818 | 35137637 ~ 35138554 (-) |
