Gene
RNA
| Item | Value |
|---|---|
| gene id | G1540546 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33478029 ~ 33478306 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1763036 | True | 278 | lncRNA | 0.50 | 1 | 33478029 | 33478306 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cdcp1b | cdcp1 | coding | downstream | 63071 | 33392413 ~ 33414958 (-) |
| LOC110496036 | LOC106588206 | coding | downstream | 98521 | 33366687 ~ 33379508 (-) |
| LOC110496796 | osbpl10 | coding | downstream | 168698 | 33172426 ~ 33309331 (-) |
| eomesa | eomesa | coding | downstream | 1023646 | 32450001 ~ 32454383 (-) |
| LOC110496030 | LOC106588196 | coding | downstream | 1060206 | 32365592 ~ 32417823 (-) |
| LOC110496042 | ddah2 | coding | upstream | 47835 | 33526141 ~ 33533687 (-) |
| LOC110496044 | LOC106588213 | coding | upstream | 82536 | 33560842 ~ 33573866 (-) |
| LOC110496045 | lynx1 | coding | upstream | 93708 | 33572014 ~ 33573707 (-) |
| LOC110496046 | lynx1 | coding | upstream | 101490 | 33579796 ~ 33581971 (-) |
| LOC110496048 | LOC106588215 | coding | upstream | 128643 | 33602474 ~ 33610948 (-) |
| G1540544 | NA | non-coding | downstream | 1210 | 33476283 ~ 33476819 (-) |
| G1540533 | NA | non-coding | downstream | 7618 | 33470138 ~ 33470411 (-) |
| G1540532 | NA | non-coding | downstream | 8313 | 33469478 ~ 33469716 (-) |
| G1540531 | NA | non-coding | downstream | 9080 | 33468634 ~ 33468949 (-) |
| G1540521 | NA | non-coding | downstream | 15709 | 33462105 ~ 33462320 (-) |
| G1540636 | NA | non-coding | upstream | 15817 | 33494123 ~ 33494528 (-) |
| G1540637 | NA | non-coding | upstream | 16293 | 33494599 ~ 33494802 (-) |
| G1540640 | NA | non-coding | upstream | 19763 | 33498069 ~ 33498299 (-) |
| G1540648 | NA | non-coding | upstream | 30047 | 33508353 ~ 33508611 (-) |
| G1540627 | LOC106570065 | non-coding | upstream | 30513 | 33508819 ~ 33513984 (-) |
| G1540473 | LOC106581475 | other | downstream | 86277 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 541460 | 32899578 ~ 32936569 (-) |
| G1539348 | NA | other | downstream | 915909 | 32561726 ~ 32562120 (-) |
| atp5if1a | LOC106588193 | other | downstream | 1419244 | 32057280 ~ 32058819 (-) |
| G1538595 | NA | other | downstream | 1762848 | 31714506 ~ 31715181 (-) |
| LOC110496049 | LOC106588217 | other | upstream | 179335 | 33657641 ~ 33674304 (-) |
| G1541318 | NA | other | upstream | 683621 | 34161927 ~ 34162458 (-) |
| atp9b | atp9b | other | upstream | 1257068 | 34735374 ~ 34794929 (-) |
| G1542988 | sast | other | upstream | 1659331 | 35137637 ~ 35138554 (-) |
