Gene
RNA
| Item | Value |
|---|---|
| gene id | G1540656 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33537970 ~ 33538194 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1763168 | True | 225 | lncRNA | 0.52 | 1 | 33537970 | 33538194 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496042 | ddah2 | coding | downstream | 4283 | 33526141 ~ 33533687 (-) |
| cdcp1b | cdcp1 | coding | downstream | 123012 | 33392413 ~ 33414958 (-) |
| LOC110496036 | LOC106588206 | coding | downstream | 158462 | 33366687 ~ 33379508 (-) |
| LOC110496796 | osbpl10 | coding | downstream | 228639 | 33172426 ~ 33309331 (-) |
| eomesa | eomesa | coding | downstream | 1083587 | 32450001 ~ 32454383 (-) |
| LOC110496044 | LOC106588213 | coding | upstream | 22648 | 33560842 ~ 33573866 (-) |
| LOC110496045 | lynx1 | coding | upstream | 33820 | 33572014 ~ 33573707 (-) |
| LOC110496046 | lynx1 | coding | upstream | 41602 | 33579796 ~ 33581971 (-) |
| LOC110496048 | LOC106588215 | coding | upstream | 68755 | 33602474 ~ 33610948 (-) |
| LOC110496928 | NA | coding | upstream | 104732 | 33642926 ~ 33652838 (-) |
| G1540627 | LOC106570065 | non-coding | downstream | 23986 | 33508819 ~ 33513984 (-) |
| G1540648 | NA | non-coding | downstream | 29359 | 33508353 ~ 33508611 (-) |
| G1540640 | NA | non-coding | downstream | 39671 | 33498069 ~ 33498299 (-) |
| G1540637 | NA | non-coding | downstream | 43168 | 33494599 ~ 33494802 (-) |
| G1540636 | NA | non-coding | downstream | 43442 | 33494123 ~ 33494528 (-) |
| G1540713 | NA | non-coding | upstream | 82242 | 33620436 ~ 33621322 (-) |
| G1540633 | NA | non-coding | upstream | 85353 | 33623547 ~ 33623787 (-) |
| G1540717 | NA | non-coding | upstream | 88785 | 33626979 ~ 33627240 (-) |
| G1541007 | NA | non-coding | upstream | 118531 | 33656725 ~ 33656944 (-) |
| lrp12 | lrp12 | non-coding | upstream | 315693 | 33828341 ~ 33867431 (-) |
| G1540473 | LOC106581475 | other | downstream | 146218 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 601401 | 32899578 ~ 32936569 (-) |
| G1539348 | NA | other | downstream | 975850 | 32561726 ~ 32562120 (-) |
| atp5if1a | LOC106588193 | other | downstream | 1479185 | 32057280 ~ 32058819 (-) |
| G1538595 | NA | other | downstream | 1822789 | 31714506 ~ 31715181 (-) |
| LOC110496049 | LOC106588217 | other | upstream | 119447 | 33657641 ~ 33674304 (-) |
| G1541318 | NA | other | upstream | 623733 | 34161927 ~ 34162458 (-) |
| atp9b | atp9b | other | upstream | 1197180 | 34735374 ~ 34794929 (-) |
| G1542988 | sast | other | upstream | 1599443 | 35137637 ~ 35138554 (-) |
