Gene
RNA
| Item | Value |
|---|---|
| gene id | G1540586 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33554786 ~ 33558100 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1763076 | True | 497 | lncRNA | 0.34 | 2 | 33554786 | 33558100 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496043 | LOC106588212 | coding | upstream | 17217 | 33535229 ~ 33537569 (+) |
| LOC100136630 | LOC106570065 | coding | upstream | 42360 | 33508836 ~ 33512426 (+) |
| LOC118941241 | NA | coding | upstream | 42827 | 33511830 ~ 33511959 (+) |
| LOC118941235 | NA | coding | upstream | 43858 | 33510802 ~ 33510928 (+) |
| LOC118941240 | NA | coding | upstream | 44443 | 33510212 ~ 33510343 (+) |
| LOC110496055 | LOC106588221 | coding | downstream | 380582 | 33938682 ~ 34059960 (+) |
| LOC110496056 | dpy19l4 | coding | downstream | 522008 | 34080108 ~ 34088560 (+) |
| ints8 | ints8 | coding | downstream | 534147 | 34092247 ~ 34116282 (+) |
| LOC110496058 | LOC106588349 | coding | downstream | 569092 | 34127192 ~ 34133734 (+) |
| trhrb | LOC106588145 | coding | downstream | 703212 | 34261312 ~ 34265470 (+) |
| G1540568 | NA | non-coding | upstream | 29733 | 33524813 ~ 33525053 (+) |
| G1540567 | NA | non-coding | upstream | 30244 | 33524323 ~ 33524542 (+) |
| G1540553 | NA | non-coding | upstream | 37571 | 33514208 ~ 33517215 (+) |
| G1540563 | NA | non-coding | upstream | 51303 | 33503265 ~ 33503483 (+) |
| G1540562 | NA | non-coding | upstream | 53353 | 33501214 ~ 33501433 (+) |
| G1540588 | NA | non-coding | downstream | 12179 | 33570279 ~ 33579015 (+) |
| G1540590 | NA | non-coding | downstream | 13533 | 33571633 ~ 33582747 (+) |
| G1540606 | LOC106588215 | non-coding | downstream | 43818 | 33601918 ~ 33608105 (+) |
| G1540621 | NA | non-coding | downstream | 63290 | 33621390 ~ 33621658 (+) |
| G1540721 | NA | non-coding | downstream | 78269 | 33636369 ~ 33637496 (+) |
| G1540551 | NA | other | upstream | 63665 | 33489337 ~ 33491121 (+) |
| LOC110496797 | LOC106570068 | other | upstream | 96362 | 33455560 ~ 33458964 (+) |
| G1539671 | LOC106582599 | other | upstream | 494929 | 33058990 ~ 33059857 (+) |
| G1539641 | NA | other | upstream | 534242 | 33020228 ~ 33020544 (+) |
| G1540996 | NA | other | downstream | 520618 | 34078718 ~ 34079074 (+) |
| mbpa | LOC106588233 | other | downstream | 1325414 | 34883492 ~ 34898413 (+) |
| G1541989 | NA | other | downstream | 1724503 | 35282603 ~ 35283706 (+) |
| G1542037 | LOC106588244 | other | downstream | 1817144 | 35373871 ~ 35386463 (+) |
