Gene
RNA
| Item | Value |
|---|---|
| gene id | G1540633 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33623547 ~ 33623787 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1763139 | True | 241 | lncRNA | 0.41 | 1 | 33623547 | 33623787 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496048 | LOC106588215 | coding | downstream | 12599 | 33602474 ~ 33610948 (-) |
| LOC110496046 | lynx1 | coding | downstream | 41576 | 33579796 ~ 33581971 (-) |
| LOC110496044 | LOC106588213 | coding | downstream | 49681 | 33560842 ~ 33573866 (-) |
| LOC110496045 | lynx1 | coding | downstream | 49840 | 33572014 ~ 33573707 (-) |
| LOC110496042 | ddah2 | coding | downstream | 89860 | 33526141 ~ 33533687 (-) |
| LOC110496928 | NA | coding | upstream | 19139 | 33642926 ~ 33652838 (-) |
| LOC110496049 | LOC106588217 | coding | upstream | 33911 | 33657641 ~ 33674304 (-) |
| LOC110496050 | csnk2b | coding | upstream | 68605 | 33692392 ~ 33695909 (-) |
| LOC110496051 | LOC106588219 | coding | upstream | 73376 | 33697163 ~ 33746785 (-) |
| vps72a | vps72 | coding | upstream | 160147 | 33783934 ~ 33813301 (-) |
| G1540713 | NA | non-coding | downstream | 2225 | 33620436 ~ 33621322 (-) |
| G1540656 | NA | non-coding | downstream | 85353 | 33537970 ~ 33538194 (-) |
| G1540627 | LOC106570065 | non-coding | downstream | 109563 | 33508819 ~ 33513984 (-) |
| G1540648 | NA | non-coding | downstream | 114936 | 33508353 ~ 33508611 (-) |
| G1540640 | NA | non-coding | downstream | 125248 | 33498069 ~ 33498299 (-) |
| G1540717 | NA | non-coding | upstream | 3192 | 33626979 ~ 33627240 (-) |
| G1541007 | NA | non-coding | upstream | 32938 | 33656725 ~ 33656944 (-) |
| lrp12 | lrp12 | non-coding | upstream | 230100 | 33828341 ~ 33867431 (-) |
| G1541115 | NA | non-coding | upstream | 251463 | 33875250 ~ 33939003 (-) |
| G1541207 | NA | non-coding | upstream | 407710 | 34031497 ~ 34033219 (-) |
| G1540473 | LOC106581475 | other | downstream | 231795 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 686978 | 32899578 ~ 32936569 (-) |
| G1539348 | NA | other | downstream | 1061427 | 32561726 ~ 32562120 (-) |
| atp5if1a | LOC106588193 | other | downstream | 1564762 | 32057280 ~ 32058819 (-) |
| G1541318 | NA | other | upstream | 538140 | 34161927 ~ 34162458 (-) |
| atp9b | atp9b | other | upstream | 1111587 | 34735374 ~ 34794929 (-) |
| G1542988 | sast | other | upstream | 1513850 | 35137637 ~ 35138554 (-) |
| LOC110496081 | LOC106588241 | other | upstream | 1551519 | 35151351 ~ 35203984 (-) |
