Gene
RNA
| Item | Value |
|---|---|
| gene id | G1541230 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34079413 ~ 34080134 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109087737 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1763803 | True | 722 | lncRNA | 0.46 | 1 | 34079413 | 34080134 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrp12 | lrp12 | coding | downstream | 211982 | 33828341 ~ 33867431 (-) |
| vps72a | vps72 | coding | downstream | 266112 | 33783934 ~ 33813301 (-) |
| LOC110496051 | LOC106588219 | coding | downstream | 332628 | 33697163 ~ 33746785 (-) |
| LOC110496050 | csnk2b | coding | downstream | 383504 | 33692392 ~ 33695909 (-) |
| LOC110496049 | LOC106588217 | coding | downstream | 405109 | 33657641 ~ 33674304 (-) |
| gdf6b | gdf6 | coding | upstream | 98899 | 34179033 ~ 34183891 (-) |
| LOC118940975 | LOC106611608 | coding | upstream | 155254 | 34235388 ~ 34237566 (-) |
| fbxl6 | fbxl6 | coding | upstream | 515097 | 34595231 ~ 34619367 (-) |
| nfatc1 | LOC106588230 | coding | upstream | 564982 | 34645116 ~ 34704821 (-) |
| atp9b | atp9b | coding | upstream | 657693 | 34735374 ~ 34794929 (-) |
| G1541225 | NA | non-coding | downstream | 9229 | 34069967 ~ 34070184 (-) |
| G1541207 | NA | non-coding | downstream | 46194 | 34031497 ~ 34033219 (-) |
| G1541115 | NA | non-coding | downstream | 140410 | 33875250 ~ 33939003 (-) |
| G1541007 | NA | non-coding | downstream | 422469 | 33656725 ~ 33656944 (-) |
| G1541248 | NA | non-coding | upstream | 37934 | 34118068 ~ 34118453 (-) |
| G1541259 | NA | non-coding | upstream | 39741 | 34119875 ~ 34120592 (-) |
| G1541260 | NA | non-coding | upstream | 40515 | 34120649 ~ 34121034 (-) |
| G1541263 | NA | non-coding | upstream | 41485 | 34121619 ~ 34121872 (-) |
| G1541267 | NA | non-coding | upstream | 45089 | 34125223 ~ 34125508 (-) |
| LOC110496048 | LOC106588215 | other | downstream | 468520 | 33602474 ~ 33610948 (-) |
| G1540473 | LOC106581475 | other | downstream | 687661 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 1142844 | 32899578 ~ 32936569 (-) |
| G1539348 | NA | other | downstream | 1517293 | 32561726 ~ 32562120 (-) |
| G1541318 | NA | other | upstream | 81793 | 34161927 ~ 34162458 (-) |
| G1542988 | sast | other | upstream | 1057503 | 35137637 ~ 35138554 (-) |
| LOC110496081 | LOC106588241 | other | upstream | 1095172 | 35151351 ~ 35203984 (-) |
| LOC110496085 | NA | other | upstream | 1266761 | 35346895 ~ 35351655 (-) |
